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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7zu0B_

Fold library idPDB HeaderMoleculeTitle
c7zu0B_4.40PDB header: cytosolic proteinChain: B: PDB Molecule: vacuolar protein sorting-associated protein 16;


Added to library: Sat Oct 1 12:05:07 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPSFDWERLKDVFYRSRAIGELKWPTQYEEFKCALSLTVIAVEIQDFIQVYNYFGQLLGKINLQRIHEDI
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Known secondary structure (DSSP)


SS
SSSS







SS
SSS
SSTTS

SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IKFEFDKDEKLILVTKSSIKIVKGWSPLTIESVPLQDPTIDTIWDYHNGIMLLAKSRDIYKLNGNEWELL
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Known secondary structure (DSSP)

B
SSS
BSS


TTTT


SSTTT


SS
SSS


BSSSSB


 .........150.........160.........170.........180.........190.........200.........210
Sequence YENKDKKYNLLTKNHWSCNDDSIILLDVDHVYQVSTSNGALLKLITDSSWHKVTISSRGFICLYNMKDNK
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Known secondary structure (DSSP) B


TT



SSSSSB

SSSB

B

SSS
B

BTTT






SS








SS






SSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence LQIFRDPARILMEHNLDSTPDDICWCGNDTVACSFEDEIKLYGPDGLYVTFWYPFTVTNLRAEVDGLKVI
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Known secondary structure (DSSP)



SSSS

S




SS

S


TTT


BTT
SSS

SS



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TTEKIYFLSRVQPQTSNIFRIGSTEPGAMLVDSFSLLEDHAPKAIEILKNFVLEKGVLDCIAAAIDEFEP
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Known secondary structure (DSSP)
SS


B

SSTT

STTTT
GGGSSS
TTTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence KLQKMLLNAASYGKASLQYKSFDASIFVNACNTIKLLNCFRSFGIFLTVEEYRCISLKGVIDRLLKYHRY
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Known secondary structure (DSSP) TSS
TTSS
TTT



S
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YECIQICKLANERFLLGYVFTEWAKDKIKGSPDMEDDELLDKIKSRLSVIDMTDTLQMVAVAKVAYLEGR
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Known secondary structure (DSSP) TT
SS
SSS
S


SS

T
 .........500.........510.........520.........530.........540.........550.........560
Sequence FQLSRNLALLEKNEEARIEQLYNLDDDSIALKECIKVQNYSLTISLLIALSKKLTNSQLTKLLIIDMFNN
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Known secondary structure (DSSP)
TT
S
TT
T
S
STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence PLYLYYMRMDKAYLYDFYRQTDRFIDLAHVLLQQGKEQQSLHSFLPQIKDLYSQVQNSEVVNNTIEQLQR
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Known secondary structure (DSSP) TTTT
T
STT
STTTTTTT

SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence QEKLWIYQESLGKRFAISFTNMTLDQTLSKLIETGQDKQVKEIVKKFKISEKKLYHLKCKTLVEAKKFDE
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Known secondary structure (DSSP) S



TT



ST

TTSSS

T
 .........710.........720.........730...
Sequence LLQFAQPIGYMPFYTYLKSRGHMDKASPYVNMI
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Known secondary structure (DSSP)



TTSTTT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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