Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7zu0A_

Fold library idPDB HeaderMoleculeTitle
c7zu0A_4.40PDB header: cytosolic proteinChain: A: PDB Molecule: e3 ubiquitin-protein ligase pep5;


Added to library: Sat Oct 1 12:53:23 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSSWRQFQLFENIPIRDPNFGGDSLLYSDPTLCAATIVDPQTLIIAVNSNIIKVVKLNQSQVIHEFQSFP
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)
TTS
B




TTTT
TT

SSS


S
TTTTTSSS

B



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence HDFQITFLKVINGEFLAESIGKPSLIRVYKLEKLPNREQLYHSQVELKNGNNTYPISVVSISNDLSCIVV
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TT





STTS


SS
TT



STT


STT


S



SSS






TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GFINGKIILIRGDISIIYEDPSKEPITALFLNNDATACFAATTSRILLFNTTGRNRGRPSLVLNSKNGLD
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

SS












SS



TTS
SS


S

TT


TTTTTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence LNCGSFNPATNEFICCLSNFIEFFSSSGKKHQFAFDLSLRKRIFCVDKDHILIVTENRIFIIDAKNKIIS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TT

TTTT
SS


SS








S


TT

TTT

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence LNFVVSSAIIDIFSTSQSGKNITYLLTSEGVMHRITPKSLENQINIIIQKELYPFALQLAKQHSLSPLDV
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


SS

SSSS

SSS


TT
TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence QEIHKKYGDYLFKKGLRKEATDQYIQCLDVVETSEIISKFGVKEVPDPESMRNLADYLWSLIKNSISQRD
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) T
T
TTTS
TSSSSS


TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence HVTLLLIVLIKLKDVEGIDTFIQHFDRKGIWNEGVVMDDMDDVTFFYSDNDFFDLDLILELMKESDFKRL
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) T
S
SSS


SS





S
T




S
TT
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence SYRLAKKYSKDSLIIVDILLNLLHNPVKAIKYIKSLPIDETLRCLVTYSKKLLEESPNETNALLIEVFTG
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) S
S
TTS

TS

TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KFKPSTFEVIRTVFYSYKTFFNYMNSNPTYHPPKPSIVFSSFVTKPFEFVVFLEACLACYQQYEGFDEDR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)










S


S


S



GGGTTTTSSS
SS


 .........640.........650.........660.........670.........680.........690.........700
Sequence QVILTTLYDLYLNLAQNDVPERIDDWRSRATGVLRESNKLVYSAASNNTSKRVDNSIMLLISHMDQSSAS
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TTTS
GGGTTTS
S
SS





S
 .........710.........720.........730.........740.........750.........760.........770
Sequence AKDKTKIDIASFANDNPEMDLLSTFRAMTLNEEPSTCLKFLEKYGTEEPKLLQVALSYFVSNKLIFKEMG
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) SS

SSGGGS
SS





TTS
TTT
TS
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence GNEVLKEKVLRPIIEGERMPLLDIIKALSRTNVAHFGLIQDIIIDHVKTEDTEIKRNEKLIESYDKELKE
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) TTTTT
S

SS

T
 .........850.........860.........870.........880.........890.........900.........910
Sequence KNKKLKNTINSDQPLHVPLKNQTCFMCRLTLDIPVVFFKCGHIYHQHCLNEEEDTLESERKLFKCPKCLV
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP) S
SSSS




SS



TTTSS
SSSS



TT




TTT









T
 .........920.........930.........940.........950....
Sequence DLETSNKLFEAQHEVVEKNDLLNFALNSEEGSRDRFKVITEFLG
Predicted secondary structure











SS confidence











































Known secondary structure (DSSP)
TSTGGGT
TS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D