PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7zr2A_

Fold library id	PDB Header	Molecule	Title
c7zr2A_	1.45	PDB header: antiviral protein	Chain: A: PDB Molecule: spike protein s2',chimeric protein mimic of sars-cov-2

Links to external resources
Added to library: Sat Nov 12 12:00:49 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D V L Y E N Q K L I A N K F N S A I G K I Q D S L S S T A S E L G K L Q D E V N Q N A Q D L N T L V K Q L S S N F G R I S S E L N D I L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R L D K G E P A K D L R S D I D N L E S K I A G F N S S L Q K V L T N L A Q K N Q N V E D K L K G L E S R T S S L E K Q I K G I A S N F Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E I L K Q R E Y L V N K G S G N V L Y E N Q K L I E N Q F N S A I G K I Q D S L S S T K S A L G K L K D V V N Q N K Q A L N T L V K Q L S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T T
T T

. . . . . . . . . 220 . . . . . . .

Sequence N F G A I S S V L N D I K S R L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	V	L	Y	E	N	Q	K	L	I	A	N	K	F	N	S	A	I	G	K	I	Q	D	S	L	S	S	T	A	S	E	L	G	K	L	Q	D	E	V	N	Q	N	A	Q	D	L	N	T	L	V	K	Q	L	S	S	N	F	G	R	I	S	S	E	L	N	D	I	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	L	D	K	G	E	P	A	K	D	L	R	S	D	I	D	N	L	E	S	K	I	A	G	F	N	S	S	L	Q	K	V	L	T	N	L	A	Q	K	N	Q	N	V	E	D	K	L	K	G	L	E	S	R	T	S	S	L	E	K	Q	I	K	G	I	A	S	N	F	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	I	L	K	Q	R	E	Y	L	V	N	K	G	S	G	N	V	L	Y	E	N	Q	K	L	I	E	N	Q	F	N	S	A	I	G	K	I	Q	D	S	L	S	S	T	K	S	A	L	G	K	L	K	D	V	V	N	Q	N	K	Q	A	L	N	T	L	V	K	Q	L	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G	T	T			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Sequence	N	F	G	A	I	S	S	V	L	N	D	I	K	S	R	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)