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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7zoqB_

Fold library idPDB HeaderMoleculeTitle
c7zoqB_3.20PDB header: antiviral proteinChain: B: PDB Molecule: cas7-11;


Added to library: Sat Dec 3 11:16:16 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QHIIPLTITFLESFRVIEWHKSSDRNSLRFLRGYAYARWHRSLKNNKGRPYITGTLVRSAIIRAAEELLW
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Known secondary structure (DSSP)
SS
B




GGGTTSTTTTSB


TTTS


B
 .........80.........90.........100.........110.........120.........130.........140
Sequence LNDGNYKGAICCPGEFNGSNAKVFREGKARRLRRRQTLTWPTKCACHEKEPCPFCLLLGRYEKSSKTSKS
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Known secondary structure (DSSP) TTTTT











SSSS







S
B





S


SSS

TGGG

TT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PVLNNVNFSNFNVLGKEKEFLNIEDVADMRVVNRVDQQSGKAEDFFNIWEITDGAWKIFRGEIQVSDKGW
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Known secondary structure (DSSP) SS

S

BTT
SS



STTT



SSSS




SSS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SDEENFSKFLTLLKGASVLVDKISGGLCYLTLDKPELALEPGDDASVLEISRPPYWNNMLNLAGTISEAF
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Known secondary structure (DSSP)
S

B
SSSB










SS







TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EREDKLVHLRLFADTVRELRRSDIETLDLPKGHADRLGKPSDHFIWDIEINKKVKLRNWLFWIFNEFRDT
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Known secondary structure (DSSP) T
GGG
STT








TTT




TTTT

BTTB

 .........360.........370.........380.........390.........400.........410.........420
Sequence YAYFDWRTFCEALGQALYLEAKKQVPNQFSSERPVGATPAMEVKTPEHDPGRAAQGPRYEWLIKGELVSQ
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Known secondary structure (DSSP) SSS


TTS






S









SS


B





S
 .........430.........440.........450.........460.........470.........480.........490
Sequence TPFFFGWSTEATNLKLLAARDGRLRLPLSVLRGILRRDIKVVLDNKCRAELAMKQPCSCPVCNLMKKITI
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Known secondary structure (DSSP) S









S
B
TTS
B
T





SS
SS


GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence RDSFSSNYAEPPKIRHKIRLDPKSGTVAKGALFDSEVGPRGVVFPFELRLRSADDTLPQALKTVFSWWQQ
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Known secondary structure (DSSP)


SS

S



TTTT
SS



B

S
SS

T
 .........570.........580.........590.........600.........610.........620.........630
Sequence GTVSFSGDAGTGKGIFCLRNLKSIRWDLKTEMDKYAATLGGRKTPVGKWDKCHIPDDKTYPWVKETVEIS
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Known secondary structure (DSSP) T
SB
SS
GGGS

BTTT
GGGTSS

S










S
 .........640.........650.........660.........670.........680.........690.........700
Sequence VCSPFITKDPVNSLIDSAGYDAICYTTVDLEKKDIYLLKGESFRGMLRTAVGRGENLLLREHEDCSCTLC
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Known secondary structure (DSSP)
S
B



TTGGGT
TT

S




BS




T
SSS

SS


 .........710.........720.........730.........740.........750.........760.........770
Sequence RIFGNEHNAGKIRVEDFIIQGEPRTKLVDRVAIDRFTAGAKDKFKFDAAPIVGTPTNKLKFRGNIWIHRD
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Known secondary structure (DSSP) T

TTS

S

S


B



B
SSSSSBSSS



B


SSS
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence LDGLACESLKLALEDIENGLYPFGGLGNAGFGWVNYNPLSHPAQEENKADFSLTKKMELNWSMKELSTDK
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Known secondary structure (DSSP)

TSS
SSS
GGGT
S
BS

TTSS



S
SS


TT

TT




TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence IYWPHYFLPFGKKVLREKTPPSHACIDENEDSELYSGKIVCTLETRTPLIIPDSEFQGEEHKSYDFFNLN
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Known secondary structure (DSSP)
S


S



BS



SS
S


SSS

SS
B


SSS

BSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence GELCIPGSEIRGMISSVFEALTNSCMRIFDEKKRLSWRMNPNKNRRELDDFIPGRVTNDRKMEEMKEYRY
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Known secondary structure (DSSP) S
B
B
T


SS


S




B

S



S






B
SSS
TT
B


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence PFYDQAITANDKQNKYFDQWEATIELTDESLEKLKAEKILQSVLDALRPLTKKKEKYKNTETFVFDLKKF
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Known secondary structure (DSSP)

S

S



S

SS





TTT

T





 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence IGKIDDNQQMISEALERGKVRLTGNSLKQISKTKKIPRQILNQLKGLKDNTYENREQFISVLKTTVRGIN
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Known secondary structure (DSSP)

GGGGS

TT
SSS
TTT
SSS
SS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DEQISLILDNIDEDVRLTDLSLTKIRKAKVPQTLVDMLADLKKDEPYKNEKEFLSEFKKKMGEIIGLILK
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Known secondary structure (DSSP) SGGG


TT

T

SS

S
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence HAAKTGGDVPRYNHPTPTDKMLLSLAAYNRNHKHENGKAEYRIVKPKHNLKVDFMFAVTYLKVSGPNKIE
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Known secondary structure (DSSP) T



SS



S
TTS



S


SSS




B

SS

SSTT


B














 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence KVKKVNPNSVSVRDDKNQEIIHNGVYLRKITVANAKSKNKLRERLVPEFAWYDKSEAAYAMTKRCERVFV
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Known secondary structure (DSSP)









SS




TT










S

SS











TT


S









 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence EIGAKPIPIQPSAREKFKILTQEYQKNAKQQKTPEAFQTILPKDGELRPGDLVYFREDKKTNTVTDIIPV
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Known secondary structure (DSSP)






B
TT

STT
SS


SSS

TT



STTS
SS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence RISRTVDDEVLARKIPDDVGDVRPCVREILDKEKQKEIADAGVKEVFQHHPDGLCPACSLFGTTFYKGRI
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Known secondary structure (DSSP) SS
B


SS
GGG
S
TTS


S
SS

GGGSTTT

SSS
S
SS
B


SSS

S
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence AFGFAFHKDKDPELANNGKHITLPLLERPRPTWSMPKKESRVPGRKFYVHHQGWERVIKHSNLDESDPNA
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Known secondary structure (DSSP)

BB
SSSS

BGGGG








STTS

STT








TSS

TTSTTS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence TKQTVNNRSVQAIKEEQKFQFEVRFENLREWELGLLVYVLQLEPQFAHKLGMGKALGFGSVRIRVGEIHS
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Known secondary structure (DSSP)



TT


B
SS

S

TTB

SS
GGGTTT
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence GPKELDESRLVSSAMKKMEEIWDRDKNVLEKLFRLLYFNESKDIKVRYPKLQKEKEEEEEESGYMELAKE
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Known secondary structure (DSSP) TTS


SS

TB



TT

B



SS

SSS


S

TTT
 .........1690.........1700..
Sequence EYQPEQRRNKLTNPWEGWGNIL
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Known secondary structure (DSSP) TSSSSSSSSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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