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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7zoqA_

Fold library idPDB HeaderMoleculeTitle
c7zoqA_3.20PDB header: antiviral proteinChain: A: PDB Molecule: tpr-chat;


Added to library: Sat Dec 3 12:21:47 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSAFSGLKIPELSVDPAEVFKSDNPQLVSVLLDEFELQEQRPFFSGLIPEKQINIALKKSPQLKKLACHL
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Known secondary structure (DSSP)

S


SSBTTB
B

S
GGGSS
TSB

SSS






S

SS

TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LEAYEINGRRWKHADRRRVLEKAIRLLEKVSNELKGDIQKLENNVKESGKDSEELNKTREKHGEILADMG
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Known secondary structure (DSSP) TTTS
TTTS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RAYLHRAKIIRPKGFTIPAKKKESLRKALDFCKEAKARHLAGLVGLEMDRCDMSDFDSENSLEKLLRDAT
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Known secondary structure (DSSP) TT



SSS

TT
STT




STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TGVSLSKDQYYSNEYRKAEYYQMCIRLAEIEEDKHGATDEGSENNRYKRLEGILGPKKSQGKKKGKKNKK
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Known secondary structure (DSSP) TT


TT
STTSSTSTT

TTS









TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence KKGTNSKSALEKIMAFEKFKVAVYLGEGKEKTHWNDFSEFLMRYPFSHPSWEDSVRFLRRLYKKGNDKWR
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Known secondary structure (DSSP) TT
TT



SS

S
TTST
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence ELSVALWEIAKKNSAKTSSIHLRWYWSRQRDLYDLAFLSALEQADIAEDESVRQEKLRLAAKVADSAKNR
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Known secondary structure (DSSP) TTS
TT





TTST


SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PALTWQAMEQMADKDEALKKEIENYAQALGGGYIEQFEKTDDIPDDLKTSGLVVQFYLVHLKDYENGYAL
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Known secondary structure (DSSP)


TTTTS
TSS







SSS



SS

SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence IYDGKTKKWSCEMFNFFPIWEKYLQWQSVYFDLPANQKEESADQLKALCLELGRHLYFLFDFEENRKAHE
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Known secondary structure (DSSP) TTT



B


S
GGGGGGGTGGGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence KNQDTAKENWDMLFIPHDFLHRVPIHGAIKKNGTNILLKKFNCTYFPTLPNASITPESPKSDNVAELIEY
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Known secondary structure (DSSP) TSSSS






GGGGGS
GGG
B
TTS

BS
SS










SS

SB


 .........640.........650.........660.........670.........680.........690.........700
Sequence FSEHEKDYSEYFDKIEHIFDKKNRAATSQDLLDAAISPPRTLTIYCHGQSDVNNPFYSRLLLKDKLELIK
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Known secondary structure (DSSP)

STT

SS


T

S

S


SS
GGG
SSSB

 .........710.........720.........730.........740.........750.........760.........770
Sequence LATLQEHYSGTHIFLGACETDLMPPLSAPLDEQLSMAAMFLQKGVGSVLGTLWEAYPRAVKDIVKNILSA
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Known secondary structure (DSSP)

S



S

S
S



SS





GGGT
SSS


S
 .........780.........790.........800.........810..
Sequence DDTQYFEKLFSLKKKISVNQKKSLYYYLCFKLYRSFDQIGKE
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Known secondary structure (DSSP)
STTGGGGG

SS
S

TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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