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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7z8eA_

Fold library idPDB HeaderMoleculeTitle
c7z8eA_1.58PDB header: transport proteinChain: A: PDB Molecule: abc transporter substrate-binding protein;


Added to library: Sat Feb 25 09:42:51 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEEQPVWHHATSSIGEPKYKDGFARFDYVNPDAPKGGELRLSESGTFDSFNPILAKGEVATGVSSLVFET
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Known secondary structure (DSSP)


S

S
SSS

SS
TT

S
TTS
TT




S


B

SS
SSS
B
T
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLKSAEDEITTSYGLLAEGISYPDDISSATFRLRAEAKWADGKPVTPEDVVFSFDMVKEHNPLFSNYYRH
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Known secondary structure (DSSP) S
TTSSS
SS

TT
S
TT
B
TTS
B


TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence VISAEKTGERDVTFRFDEKNNHELPNILGQFPILPKHWWEGQDAKGSKRDISRTTLEPVMGSGPYKIASF
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Known secondary structure (DSSP)
SSSSSS

TTGGGS
B

TSB
TTS
B

TTS


S



SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QAGGSIRFELRDDYWGKDLNVNVGRYNFRTINYAFFSDRSVQFEAFRAGNVDFYQDNSASHWATAYDFPA
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Known secondary structure (DSSP) TTT
TT
TTTTSGGGTT



SS
TTSS


S

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence MKDGRVIREEIENPLRATGIMQAFVPNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAFQRVDSYFWGT
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Known secondary structure (DSSP) TTS
GGGTT

TTSGGG



TSTT



STTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ELASSGLPEGREKEILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKALALFKEAGYELKGSRLVNAK
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Known secondary structure (DSSP) TTS

SS

TTGGGS
T








STTTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence TGEPFSFEILLSNPTFERTVTPFVNSVRKIGIDARIRTVDDSQYTNRVRSYDYDMIYGIWAQTLVPGNEQ
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Known secondary structure (DSSP) T

B
SSGGGTT


TT

S
SS

GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence SDYWGSASVNQPGSRNYAGIADPAIDELIRRIVFAPNREELVATTRALDRVLLAHHYVVPLFYSKALRVA
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Known secondary structure (DSSP)
GGGTTSTT
S
TT



T
SSTT
S

SS
 .........570.........580.........590
Sequence YWNHLARPKELPYYGMDFPDAWWSKNTAAK
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Known secondary structure (DSSP) TT

SS

TT


TTTT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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