PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7yxxC_

Fold library id	PDB Header	Molecule	Title
c7yxxC_	3.30	PDB header: hydrolase	Chain: C: PDB Molecule: probable ubiquitin carboxyl-terminal hydrolase faf-x;

Links to external resources
Added to library: Sat Mar 5 11:32:03 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V P G Q E E T V K N L E I F R L K M I L R L L Q I S S F N G K M N A L N E V N K V I S S V W L T A E R M A E W I Q Q N N I L S I V L R D S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
T T T G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H Q P Q Y V E K L E K I L R F V I K E K A L T L Q D L D N I W A A Q A G K H E A I V K N V H D L L A K L A W D F S P E Q L D H L F D C F K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G S T T T
G G G S S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S W T N A S K K Q R E K L L E L I R R L A E D D K D G V M A H K V L N L L W N L A H S D D V P V D I M D L A L S A H I K I L D Y S C S Q D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S T
T T S
T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D T Q K I Q W I D R F I E E L R T N D K W V I P A L K Q I R E I C S L F Y R H D L I N Q L Q H N H A L V T L V A E N L A T Y M E S M R L Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S
S S
T T S S S
T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence R D H E D Y D P H V Q E V Q E R L N F L R F L L K D G Q L W L C A P Q A K Q I W K C L A E N A V Y L C D R E A C F K W Y S K L M G D E P D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T T S
T T T T T
S S T T T S
S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence D P D I N K D F F E S N V L Q L D P S L L T E N G M K C F E R F F K A V N C R E G K L V A K R R A Y M M D D L E L I G L D Y L W R V V I Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S
T T S
T S
S S S
S S
S S S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence N D D I A S R A I D L L K E I Y T N L G P R L Q V N Q V V I H E D F I Q S C F D R L K A S Y D T L C C A R Q E A V R M V R V L T V L R E Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T S T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence N E C D S S L H P R Y I S F L W Q V A D L G S S L N M P P L R D G A R V L M K L M P P D S T T I E K L R A I C L D H A K L D S L F F G P S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S
T
S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence S Q V L Y L T E V V Y A L L M P S S D F Q F H F L K S G G L P L V L S M L T R N N F L P N A D M E T R R G A Y L N A L K I A K L L L T A I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence Y G Y M P D I C V I R A I Q K I I W A S G C G S L Q L V F S P N E E I T K I Y E K T N A G N E P D L E D E Q V C C E A L E V M T L C F A L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G T T S
S S T T S T T
T T S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence P T A L D A L S K E K A W Q T F I I D L L L H C H S K T V R Q V A Q E Q F F L M C T R C C M G H R P L L F F I T L L F T V L G S T A R E R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S S T T T T T
S T T T
S S S
S T T S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence K H S G D Y F T L L R H L L N Y A Y N S N I N V P N A E V L L N N E I D W L K R I R D D V K R T G E T G I E E T I L E G H L G V T K E L L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T
S S
T S S
S S
T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence F Q T S E K K F H I G C E K G G A N L I K E L I D D F I F P A S N V Y L Q Y M R I P V C G S P P T I N A G F E L L V A L A V G C V R N L K Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S T T T S S S S
S S S
T T T
S
S
S T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence I V D S L T E M Y Y I G T A I T T C E A L T E W E Y L P P V G P R P P K G F V G L K N A G A T C Y M N S V I Q Q L Y M I P S I R N G I L A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S T T T
S
S S B
S S
T T S
S S
S T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence E G T G K T E D R K E Y N I G V L R H L Q V I F G H L A A S R L Q Y Y V P R G F W K Q F R L W G E P V N L R E Q H D A L E F F N S L V D S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence D E A L K A L G H P A M L S K V L G G S F A D Q K I C Q G C P H R Y E C E E S F T T L N V D I R N H Q N L L D S L E Q Y V K G D L L E G A N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
S S S
S S
T T
S B
G G G

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence A Y H C E K C N K K V D T V K R L L I K K L P P V L A I Q L K R F D Y D W E R E C A I K F N D Y F E F P R E L D M E P Y T V A G V A K L E G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S
T T T T
B
B
S
T T T B T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence D G S T K Y R L V G V L V H S G Q A S G G H Y Y S Y I I Q R N G G R W Y K F D D G D V T E C K M D D D E E M K N Q C F G G E Y M G E V F D H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S
T T
T T S T S B
T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence M M K R M S Y R R Q K R W W N A Y I L F Y E R M Q D D E L I R Y I S I E R S V R K Q N V Q F M H N R M Q Y S M E Y F Q F M K K L L T C N G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S T T T S
T
T T G G

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence Y L N P P P G Q D H L L P E A E E I T M I S I Q L A A R F L F T T G F H T K K V V R G S A S D W Y D A L C I L L R H S K N V R F W F A H N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
S
T T
S S
T T T T B
T T T

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence L F N V S N R F S E Y L L E C P S A E V R G A F A K L I V F I A H F S L Q D G P C P S P F N L S L S D H L L R A V L N L L R R E V S E H G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S S T T
T S S S
G G G T T T T T

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence H L Q Q Y F N L F V M Y A N L G V A E K T Q L L K L S V P A T F M L V S L D E G P G P P I K Y Q Y A E L G K L Y S V V S Q L I R C C N V S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T T T
S S S
T T
T T
G G

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence R M Q S S I N G N P P L P N P F G D P N L S Q P I M P I Q Q N V A D I L F V R T S Y V K K I I E D C S N S E E T V K L L R F C C W E N P Q F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
S S T T S
S S S
S S
S S
S
T T
T S
S S S S T T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence S S T V L S E L L W Q V A Y S Y T Y E L R P Y L D L L L Q I L L I E D S W Q T H R I H N A L K G I P D D R D G L F D T I Q R S K N H Y Q K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G T
S T T T
S T T T S
S S S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 .

Sequence A Y Q C I K C M V A L F S N C P V A Y Q I L Q G N G D L K R K W T W A V E W L G D E L E R S H S A R M T L A K A C E L C P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	P	G	Q	E	E	T	V	K	N	L	E	I	F	R	L	K	M	I	L	R	L	L	Q	I	S	S	F	N	G	K	M	N	A	L	N	E	V	N	K	V	I	S	S	V	W	L	T	A	E	R	M	A	E	W	I	Q	Q	N	N	I	L	S	I	V	L	R	D	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S																				S	S																																		T							T	T	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	Q	P	Q	Y	V	E	K	L	E	K	I	L	R	F	V	I	K	E	K	A	L	T	L	Q	D	L	D	N	I	W	A	A	Q	A	G	K	H	E	A	I	V	K	N	V	H	D	L	L	A	K	L	A	W	D	F	S	P	E	Q	L	D	H	L	F	D	C	F	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S																T	T	T												G	G	G	S	S																	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	W	T	N	A	S	K	K	Q	R	E	K	L	L	E	L	I	R	R	L	A	E	D	D	K	D	G	V	M	A	H	K	V	L	N	L	L	W	N	L	A	H	S	D	D	V	P	V	D	I	M	D	L	A	L	S	A	H	I	K	I	L	D	Y	S	C	S	Q	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									S	S	T	T	S													T		T	T	S																			T		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	T	Q	K	I	Q	W	I	D	R	F	I	E	E	L	R	T	N	D	K	W	V	I	P	A	L	K	Q	I	R	E	I	C	S	L	F	Y	R	H	D	L	I	N	Q	L	Q	H	N	H	A	L	V	T	L	V	A	E	N	L	A	T	Y	M	E	S	M	R	L	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S													T	T	S		S	S																									T	T	S	S	S																					T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	D	H	E	D	Y	D	P	H	V	Q	E	V	Q	E	R	L	N	F	L	R	F	L	L	K	D	G	Q	L	W	L	C	A	P	Q	A	K	Q	I	W	K	C	L	A	E	N	A	V	Y	L	C	D	R	E	A	C	F	K	W	Y	S	K	L	M	G	D	E	P	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		S	S																		T	T	T	S															T	T	T	T	T		S	S															T	T	T	S		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	P	D	I	N	K	D	F	F	E	S	N	V	L	Q	L	D	P	S	L	L	T	E	N	G	M	K	C	F	E	R	F	F	K	A	V	N	C	R	E	G	K	L	V	A	K	R	R	A	Y	M	M	D	D	L	E	L	I	G	L	D	Y	L	W	R	V	V	I	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	T	S		T	T	S																					T	S					S	S	S						S	S		S	S										S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	D	D	I	A	S	R	A	I	D	L	L	K	E	I	Y	T	N	L	G	P	R	L	Q	V	N	Q	V	V	I	H	E	D	F	I	Q	S	C	F	D	R	L	K	A	S	Y	D	T	L	C	C	A	R	Q	E	A	V	R	M	V	R	V	L	T	V	L	R	E	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T				T	T	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	E	C	D	S	S	L	H	P	R	Y	I	S	F	L	W	Q	V	A	D	L	G	S	S	L	N	M	P	P	L	R	D	G	A	R	V	L	M	K	L	M	P	P	D	S	T	T	I	E	K	L	R	A	I	C	L	D	H	A	K	L	D	S	L	F	F	G	P	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T																	T														S	S																									T		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	Q	V	L	Y	L	T	E	V	V	Y	A	L	L	M	P	S	S	D	F	Q	F	H	F	L	K	S	G	G	L	P	L	V	L	S	M	L	T	R	N	N	F	L	P	N	A	D	M	E	T	R	R	G	A	Y	L	N	A	L	K	I	A	K	L	L	L	T	A	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												T										T		S	T	T		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	G	Y	M	P	D	I	C	V	I	R	A	I	Q	K	I	I	W	A	S	G	C	G	S	L	Q	L	V	F	S	P	N	E	E	I	T	K	I	Y	E	K	T	N	A	G	N	E	P	D	L	E	D	E	Q	V	C	C	E	A	L	E	V	M	T	L	C	F	A	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T		G	G	G	T	T	S		S	S							T	T	S	T	T						T	T																			S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	P	T	A	L	D	A	L	S	K	E	K	A	W	Q	T	F	I	I	D	L	L	L	H	C	H	S	K	T	V	R	Q	V	A	Q	E	Q	F	F	L	M	C	T	R	C	C	M	G	H	R	P	L	L	F	F	I	T	L	L	F	T	V	L	G	S	T	A	R	E	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T						T	T	S	S	T	T	T								T	T			S	T																T	T			S	S	S													S	T	T						S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	H	S	G	D	Y	F	T	L	L	R	H	L	L	N	Y	A	Y	N	S	N	I	N	V	P	N	A	E	V	L	L	N	N	E	I	D	W	L	K	R	I	R	D	D	V	K	R	T	G	E	T	G	I	E	E	T	I	L	E	G	H	L	G	V	T	K	E	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T																	T	T				S	S																						T	S	S		S	S																	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	F	Q	T	S	E	K	K	F	H	I	G	C	E	K	G	G	A	N	L	I	K	E	L	I	D	D	F	I	F	P	A	S	N	V	Y	L	Q	Y	M	R	I	P	V	C	G	S	P	P	T	I	N	A	G	F	E	L	L	V	A	L	A	V	G	C	V	R	N	L	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S	S	T	T	T	S	S	S	S		S	S	S										T	T	T		S													S			S																T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	I	V	D	S	L	T	E	M	Y	Y	I	G	T	A	I	T	T	C	E	A	L	T	E	W	E	Y	L	P	P	V	G	P	R	P	P	K	G	F	V	G	L	K	N	A	G	A	T	C	Y	M	N	S	V	I	Q	Q	L	Y	M	I	P	S	I	R	N	G	I	L	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	S	S	S	T	T	T						S		S	S	B			S	S					T	T	S								S	S														S									T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	E	G	T	G	K	T	E	D	R	K	E	Y	N	I	G	V	L	R	H	L	Q	V	I	F	G	H	L	A	A	S	R	L	Q	Y	Y	V	P	R	G	F	W	K	Q	F	R	L	W	G	E	P	V	N	L	R	E	Q	H	D	A	L	E	F	F	N	S	L	V	D	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																S	S														T	T					T	T	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	D	E	A	L	K	A	L	G	H	P	A	M	L	S	K	V	L	G	G	S	F	A	D	Q	K	I	C	Q	G	C	P	H	R	Y	E	C	E	E	S	F	T	T	L	N	V	D	I	R	N	H	Q	N	L	L	D	S	L	E	Q	Y	V	K	G	D	L	L	E	G	A	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T									T											S	S	S											S	S						T	T		S	B																G	G	G
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	A	Y	H	C	E	K	C	N	K	K	V	D	T	V	K	R	L	L	I	K	K	L	P	P	V	L	A	I	Q	L	K	R	F	D	Y	D	W	E	R	E	C	A	I	K	F	N	D	Y	F	E	F	P	R	E	L	D	M	E	P	Y	T	V	A	G	V	A	K	L	E	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T																S													T	T	T	T								B		B			S					T	T	T	B									T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	D	G	S	T	K	Y	R	L	V	G	V	L	V	H	S	G	Q	A	S	G	G	H	Y	Y	S	Y	I	I	Q	R	N	G	G	R	W	Y	K	F	D	D	G	D	V	T	E	C	K	M	D	D	D	E	E	M	K	N	Q	C	F	G	G	E	Y	M	G	E	V	F	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S		S	S	S																				T	T							T	T	S								T	S	B										T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	M	M	K	R	M	S	Y	R	R	Q	K	R	W	W	N	A	Y	I	L	F	Y	E	R	M	Q	D	D	E	L	I	R	Y	I	S	I	E	R	S	V	R	K	Q	N	V	Q	F	M	H	N	R	M	Q	Y	S	M	E	Y	F	Q	F	M	K	K	L	L	T	C	N	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T																								S	T	T	T	S																						T														T	T	G	G
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	Y	L	N	P	P	P	G	Q	D	H	L	L	P	E	A	E	E	I	T	M	I	S	I	Q	L	A	A	R	F	L	F	T	T	G	F	H	T	K	K	V	V	R	G	S	A	S	D	W	Y	D	A	L	C	I	L	L	R	H	S	K	N	V	R	F	W	F	A	H	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S			T	T		S	S																							T	T	T	T	B								T												T	T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	L	F	N	V	S	N	R	F	S	E	Y	L	L	E	C	P	S	A	E	V	R	G	A	F	A	K	L	I	V	F	I	A	H	F	S	L	Q	D	G	P	C	P	S	P	F	N	L	S	L	S	D	H	L	L	R	A	V	L	N	L	L	R	R	E	V	S	E	H	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	S	S							T	T																					T	S	S	S																					G	G	G	T	T					T	T	T
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	H	L	Q	Q	Y	F	N	L	F	V	M	Y	A	N	L	G	V	A	E	K	T	Q	L	L	K	L	S	V	P	A	T	F	M	L	V	S	L	D	E	G	P	G	P	P	I	K	Y	Q	Y	A	E	L	G	K	L	Y	S	V	V	S	Q	L	I	R	C	C	N	V	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S											T	T								T	T	T	T		S	S	S						T	T															T	T				G	G
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	R	M	Q	S	S	I	N	G	N	P	P	L	P	N	P	F	G	D	P	N	L	S	Q	P	I	M	P	I	Q	Q	N	V	A	D	I	L	F	V	R	T	S	Y	V	K	K	I	I	E	D	C	S	N	S	E	E	T	V	K	L	L	R	F	C	C	W	E	N	P	Q	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G				S	S	T	T	S						S	S	S		S	S		S	S		S												T	T											T	S		S	S	S										S	T	T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	S	S	T	V	L	S	E	L	L	W	Q	V	A	Y	S	Y	T	Y	E	L	R	P	Y	L	D	L	L	L	Q	I	L	L	I	E	D	S	W	Q	T	H	R	I	H	N	A	L	K	G	I	P	D	D	R	D	G	L	F	D	T	I	Q	R	S	K	N	H	Y	Q	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S		G	G	G													T			S	T	T										T		S	T	T	T	S											S	S	S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.
Sequence	A	Y	Q	C	I	K	C	M	V	A	L	F	S	N	C	P	V	A	Y	Q	I	L	Q	G	N	G	D	L	K	R	K	W	T	W	A	V	E	W	L	G	D	E	L	E	R	S	H	S	A	R	M	T	L	A	K	A	C	E	L	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T