PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7youA_

Fold library id	PDB Header	Molecule	Title
c7youA_	3.41	PDB header: virus	Chain: A: PDB Molecule: rna-directed rna polymerase l;

Links to external resources
Added to library: Sat Feb 18 08:57:02 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R A E H Q I I L P E S H L S S P L V K H K L L Y Y W K L T G L P L P D E C D F D H L I L S R Q W K K I L E S S T P D I E R M I K L G R S V H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S S
S S
S
B T T S
S T T T T
T T G G G S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q T L S H S S K L T G I L H P R C L E D L V G L D I P D S T N K F R R I E K K I Q I H N T R Y G E P F T R L C S Y V E K K L L G S S W T H K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S S
T T T T T
S T T T S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I R R S E E F D S L R T D P A F W F H S S W S T A K F A W L H V K Q I Q R H L I V A A R T R S A S N K L V T L S H R S G Q V F I T P E L V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T S S T T S S S
S
T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V T H T N E N K F T C L S Q E L V L M Y A D M M E G R D M V N I I S S T A V H L R C L A E K I D D I L R L V D A L A R D L G N Q V Y D V V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
T T T S G G G G G G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L M E G F A Y G A V Q L L E P S G T F A G D F F S F N L Q E L R D T L I C L L P Q R I A D S V T H A I A N I F S G L E Q N Q A A E M L C L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S S S T T S S T T T S
S T T
G G G S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence R L W G H P L L E S R A A A K A V R A Q M C A P K M V D F D M I L Q V L S F F K G T I I N G Y R K K N A G V W P R V K A H T I Y G N V I A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
B
S
T T S
G G G
S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L H A D S A E I S H D I M L R E Y K N L S A I E F E A C I E Y D P V T N L S M F L K D K A I A H P R N N W L A S F R R N L L S E E Q K K N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T
S
S S
S T T T T S
B B
T T S G G G G S
T T S S
T S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence Q D S T S T N R L L I E F L E S N D F D P Y K E M E Y L T T L E Y L R D D S V A V S Y S L K E I F A K L T K K L R N C Q V M A E G I L A D Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B T
S S
T T T S S T
S
B
T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence I A P F F Q G N Q D S I S L T K S M L A M S Q L S Y N S N R K R K H R R R V A T F I T T D L Q K Y C L N W R Y Q T I K L F A H A I N Q L M G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G S S
T S T G G G
T T
T T T
T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence L P H F F E W I H L R L M D T T M F V G D P F N P P S D P T D Y D L T K V P N D D I Y I V S A R G G I E G L C Q K L W T M I S I A A I Q L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T
S S T T
T T T S
S
T T S
S
T T T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence A A R S H C R V A C M V Q G D N Q V I A V T R E V R P D D S P E S V L T Q L H E A S D N F F R E L I H V N H L I G H N L K D R E T I R S D T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
T T
T T
T T
T T T S S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence F F I Y S K R I F K D G A I L S Q V L K N S S K L V L V S G D L S E N T V M S C A N I S S T V A R L C E N G L P K D F C Y Y L N Y L M S C I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
T T
S
S S S
T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence Q T Y F D S E F S I T S S S N Q S W I N D I P F I H S Y V L T P A Q L G G L S N L Q Y S R L Y T R N I G D P G T T A F A E V K R L E A V G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S
T T T T S
S S B G G G T S S B
G G G G T S
S
S
T T S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence L G P N I M T N I L T R P P G N G D W A S L C N D P Y S F N F E S V A S P S I V L K K H T Q R V L F E T C S N P L L S G V H T E D N E A E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
B
S
S
B
T T S
S S T T
T T S
S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence K A L A E Y L L N Q E V I H P R V A H A I M E A S S V G R R K Q I Q G L V D T T N T V I K I A L S R K P L G I K R L A R I I N Y S S M H A M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S B
S T T S
S
S T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence L F R D D V F L S N R A N H P L V S S D M C S L A L A D Y A R N R S W S P L T G G R K I L G V S N P D T I E L V E G E I L S I S G G C S K C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S
T T S
S
B
S
S S S
T T G

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence D S G D E Q F T W F H L P S N I E L T D D T S K N P P M R V P Y L G S K T Q E R R A A S L A K I A H M S P H V K A A L R A S S V L I W A Y G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T
S
S S
S S
S
S
S S
T T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence D N D I N W T A A L K L A R S R C N I S S E Y L R L L S P L P T A G N L Q H M T F T P A S L Y R V S P Y V H I S N D S Q R L F T E E N V V Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T
S
S S
S S
S S G G G
T T
S S S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence Q Q I M L L G L S L I E S L F P M T V T K T Y D E I T L H L H S K F S C C I R E A P V A V P F E L T G V A P D L R V V A S N K F M Y D P N P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
S
S S
T T
S
S S
T T T
S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence V A E G D F A R L D L A I F K S Y E L N L E S Y S T V E L M N I L S I S S G K L I G Q S V V S Y I I V Y D N T R N W I S E A Q N S V R L F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T S S
B T T B T T S S
T T T T T T

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence Y A A L E V L L D C S Y Q L Y Y L R V R G L N N V V L Y M S D L Y K N M P G I L L S N I A A T I S H P I I H S R L H T V G L I S H D G S H Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S T T T
S
T T S S S
S S
S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence L A D T D F I E L S A K L L V S C T R R V V S G L Y A G N K Y D L L F P S V N E K M L Q L I S R L C C L Y T V L F R E I P K I R G L P A E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S G G G T T T T
T T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence K C A M L T E Y L L S D E Q V D S I T S V T F P A N L Y Y M S R K S L N L I R E R E D R D S I L A L M F D Q L T M K P A A F L H E L D L S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S T T
G G G S T T T S
S S

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence P A R Y D D Q L V R Y L F R G V G T A S S S W Y K A S H L L S V P E I R C A R H G N S L Y L A E G S G A I M S L L E L H I P H E T I Y Y N T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S G G G G S
B
S S
S T G G G G G G
S
S S S
S S
S
S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence L F S N E M N P P Q R H F G P T P T Q F L N S V V Y R N L Q A E V P C K D G F V Q E F R T L W R E N T E E S D L T S D K A V G Y I T S V V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
T S T T
T T S S
S
T T T T
T T S S

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . . . . . . . . 1810 . . . . . . . . . 1820

Sequence Y R S V S L L H C D I E I P P G S N Q S L L D Q L A T N L S L I A M H S V R E G G V V I V K I L Y S M G Y Y F H L L V N L F T P C S V K G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S S
T T T

. . . . . . . . . 1830 . . . . . . . . . 1840 . . . . . . . . . 1850 . . . . . . . . . 1860 . . . . . . . . . 1870 . . . . . . . . . 1880 . . . . . . . . . 1890

Sequence V L S N G Y A C R G D M E C Y V V F V M G Y L G G P T F V N E V V R M A K T L I Q R H G T L L A K S D E T A L M A L F T S Q K Q R V D N I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S S S
T T
B S

. . . . . . . . . 1900 . . . . . . . . . 1910 . . . . . . . . . 1920 . . . . . . . . . 1930 . . . . . . . . . 1940 . . . . . . . . . 1950 . . . . . . . . . 1960

Sequence S S P L P R L A K L L R R N I D T A L I E A G G Q P V R P F C A E S L V N I T Q T T Q V I A S H I D T V I R S V I Y M E A I D G K K R T S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T
T T T T T S T T T
B
G G G G G

. . . . . . . . . 1970 . . . . . . . . . 1980 . . . . . . . . . 1990 . . . . . . . . . 2000 . . . . . . . . . 2010 . . . . . . . . . 2020 . . . . . . . . . 2030

Sequence K Q C T R Q I L E V T I L G L G P E D L N R V G D I I S L I L R G T I S L E D L I P L R T Y L K M S T C P K Y L K S V L G L T K L R E M F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S
S S S
T T

. . . . . . . . . 2040 . . . . . . . . . 2050 . . . . . . . . .

Sequence D G S M L Y L T R A Q Q K F Y M K T V G N A V K G Y Y N S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	A	E	H	Q	I	I	L	P	E	S	H	L	S	S	P	L	V	K	H	K	L	L	Y	Y	W	K	L	T	G	L	P	L	P	D	E	C	D	F	D	H	L	I	L	S	R	Q	W	K	K	I	L	E	S	S	T	P	D	I	E	R	M	I	K	L	G	R	S	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G	S	S				S	S			S			B											T	T	S				S	T	T	T	T		T	T	G	G	G	S						T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	T	L	S	H	S	S	K	L	T	G	I	L	H	P	R	C	L	E	D	L	V	G	L	D	I	P	D	S	T	N	K	F	R	R	I	E	K	K	I	Q	I	H	N	T	R	Y	G	E	P	F	T	R	L	C	S	Y	V	E	K	K	L	L	G	S	S	W	T	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S		S	S	S							T	T	T	T						T																																								S	T	T	T	S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	R	R	S	E	E	F	D	S	L	R	T	D	P	A	F	W	F	H	S	S	W	S	T	A	K	F	A	W	L	H	V	K	Q	I	Q	R	H	L	I	V	A	A	R	T	R	S	A	S	N	K	L	V	T	L	S	H	R	S	G	Q	V	F	I	T	P	E	L	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S		T	T	T	S	S	T	T																							S	S	S		S									T	T							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	T	H	T	N	E	N	K	F	T	C	L	S	Q	E	L	V	L	M	Y	A	D	M	M	E	G	R	D	M	V	N	I	I	S	S	T	A	V	H	L	R	C	L	A	E	K	I	D	D	I	L	R	L	V	D	A	L	A	R	D	L	G	N	Q	V	Y	D	V	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T							T	T	T																					S	G	G	G																						G	G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	M	E	G	F	A	Y	G	A	V	Q	L	L	E	P	S	G	T	F	A	G	D	F	F	S	F	N	L	Q	E	L	R	D	T	L	I	C	L	L	P	Q	R	I	A	D	S	V	T	H	A	I	A	N	I	F	S	G	L	E	Q	N	Q	A	A	E	M	L	C	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G		S	S	S	T	T	S	S															T	T	T	S																S	T	T									G	G	G	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	L	W	G	H	P	L	L	E	S	R	A	A	A	K	A	V	R	A	Q	M	C	A	P	K	M	V	D	F	D	M	I	L	Q	V	L	S	F	F	K	G	T	I	I	N	G	Y	R	K	K	N	A	G	V	W	P	R	V	K	A	H	T	I	Y	G	N	V	I	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S					B														S																													T	T	S							G	G	G			S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	H	A	D	S	A	E	I	S	H	D	I	M	L	R	E	Y	K	N	L	S	A	I	E	F	E	A	C	I	E	Y	D	P	V	T	N	L	S	M	F	L	K	D	K	A	I	A	H	P	R	N	N	W	L	A	S	F	R	R	N	L	L	S	E	E	Q	K	K	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T											T					T	T					S						S	S			S	T	T	T	T	S			B	B				T	T	S	G	G	G	G	S		T	T	S	S						T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	D	S	T	S	T	N	R	L	L	I	E	F	L	E	S	N	D	F	D	P	Y	K	E	M	E	Y	L	T	T	L	E	Y	L	R	D	D	S	V	A	V	S	Y	S	L	K	E	I	F	A	K	L	T	K	K	L	R	N	C	Q	V	M	A	E	G	I	L	A	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S			B							T		S	S								T	T	T	S	S	T						S															B																		T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	A	P	F	F	Q	G	N	Q	D	S	I	S	L	T	K	S	M	L	A	M	S	Q	L	S	Y	N	S	N	R	K	R	K	H	R	R	R	V	A	T	F	I	T	T	D	L	Q	K	Y	C	L	N	W	R	Y	Q	T	I	K	L	F	A	H	A	I	N	Q	L	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G	S	S																		T	S	T	G	G	G																		T	T		T	T	T																		T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	P	H	F	F	E	W	I	H	L	R	L	M	D	T	T	M	F	V	G	D	P	F	N	P	P	S	D	P	T	D	Y	D	L	T	K	V	P	N	D	D	I	Y	I	V	S	A	R	G	G	I	E	G	L	C	Q	K	L	W	T	M	I	S	I	A	A	I	Q	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		T	T																T	T				S	S	T	T				T	T	T	S		S		T	T				S			S			T	T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	A	R	S	H	C	R	V	A	C	M	V	Q	G	D	N	Q	V	I	A	V	T	R	E	V	R	P	D	D	S	P	E	S	V	L	T	Q	L	H	E	A	S	D	N	F	F	R	E	L	I	H	V	N	H	L	I	G	H	N	L	K	D	R	E	T	I	R	S	D	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T									T	T												T	T																												T	T					T	T	T	S				S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	F	F	I	Y	S	K	R	I	F	K	D	G	A	I	L	S	Q	V	L	K	N	S	S	K	L	V	L	V	S	G	D	L	S	E	N	T	V	M	S	C	A	N	I	S	S	T	V	A	R	L	C	E	N	G	L	P	K	D	F	C	Y	Y	L	N	Y	L	M	S	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T					T	T											T	T			S				S	S	S																				T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	Q	T	Y	F	D	S	E	F	S	I	T	S	S	S	N	Q	S	W	I	N	D	I	P	F	I	H	S	Y	V	L	T	P	A	Q	L	G	G	L	S	N	L	Q	Y	S	R	L	Y	T	R	N	I	G	D	P	G	T	T	A	F	A	E	V	K	R	L	E	A	V	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S		S						T	T	T	T	S										S	S	B	G	G	G	T	S	S	B				G	G	G	G	T	S		S		S																T	T	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	L	G	P	N	I	M	T	N	I	L	T	R	P	P	G	N	G	D	W	A	S	L	C	N	D	P	Y	S	F	N	F	E	S	V	A	S	P	S	I	V	L	K	K	H	T	Q	R	V	L	F	E	T	C	S	N	P	L	L	S	G	V	H	T	E	D	N	E	A	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T			B											S		S				B																			T	T	S			S	S	T	T		T	T	S		S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	K	A	L	A	E	Y	L	L	N	Q	E	V	I	H	P	R	V	A	H	A	I	M	E	A	S	S	V	G	R	R	K	Q	I	Q	G	L	V	D	T	T	N	T	V	I	K	I	A	L	S	R	K	P	L	G	I	K	R	L	A	R	I	I	N	Y	S	S	M	H	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	S	S	B												S										T	T	S														S				S								T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	L	F	R	D	D	V	F	L	S	N	R	A	N	H	P	L	V	S	S	D	M	C	S	L	A	L	A	D	Y	A	R	N	R	S	W	S	P	L	T	G	G	R	K	I	L	G	V	S	N	P	D	T	I	E	L	V	E	G	E	I	L	S	I	S	G	G	C	S	K	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S								S			T	T	S																				S			B		S																S	S	S				T	T	G
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	D	S	G	D	E	Q	F	T	W	F	H	L	P	S	N	I	E	L	T	D	D	T	S	K	N	P	P	M	R	V	P	Y	L	G	S	K	T	Q	E	R	R	A	A	S	L	A	K	I	A	H	M	S	P	H	V	K	A	A	L	R	A	S	S	V	L	I	W	A	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T											S					S	S			S	S												S						S			S	S			T	T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	D	N	D	I	N	W	T	A	A	L	K	L	A	R	S	R	C	N	I	S	S	E	Y	L	R	L	L	S	P	L	P	T	A	G	N	L	Q	H	M	T	F	T	P	A	S	L	Y	R	V	S	P	Y	V	H	I	S	N	D	S	Q	R	L	F	T	E	E	N	V	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S												T	T	T												S				S	S											S	S			S	S	G	G	G						T	T		S	S	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	Q	Q	I	M	L	L	G	L	S	L	I	E	S	L	F	P	M	T	V	T	K	T	Y	D	E	I	T	L	H	L	H	S	K	F	S	C	C	I	R	E	A	P	V	A	V	P	F	E	L	T	G	V	A	P	D	L	R	V	V	A	S	N	K	F	M	Y	D	P	N	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S		T	T						S									S	S		T	T														S									S	S		T	T	T			S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	V	A	E	G	D	F	A	R	L	D	L	A	I	F	K	S	Y	E	L	N	L	E	S	Y	S	T	V	E	L	M	N	I	L	S	I	S	S	G	K	L	I	G	Q	S	V	V	S	Y	I	I	V	Y	D	N	T	R	N	W	I	S	E	A	Q	N	S	V	R	L	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																G	G	G			T	T	S	S														B	T	T	B	T	T	S	S														T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	Y	A	A	L	E	V	L	L	D	C	S	Y	Q	L	Y	Y	L	R	V	R	G	L	N	N	V	V	L	Y	M	S	D	L	Y	K	N	M	P	G	I	L	L	S	N	I	A	A	T	I	S	H	P	I	I	H	S	R	L	H	T	V	G	L	I	S	H	D	G	S	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T			S	S	T	T											T		S											T	T	S										S	S						S	S		S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	L	A	D	T	D	F	I	E	L	S	A	K	L	L	V	S	C	T	R	R	V	V	S	G	L	Y	A	G	N	K	Y	D	L	L	F	P	S	V	N	E	K	M	L	Q	L	I	S	R	L	C	C	L	Y	T	V	L	F	R	E	I	P	K	I	R	G	L	P	A	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	G	G	G	T	T																			T	T																																				T	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	K	C	A	M	L	T	E	Y	L	L	S	D	E	Q	V	D	S	I	T	S	V	T	F	P	A	N	L	Y	Y	M	S	R	K	S	L	N	L	I	R	E	R	E	D	R	D	S	I	L	A	L	M	F	D	Q	L	T	M	K	P	A	A	F	L	H	E	L	D	L	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T														S	S																	S	T								T			G	G	G	S	T	T	T	S							S	S
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	P	A	R	Y	D	D	Q	L	V	R	Y	L	F	R	G	V	G	T	A	S	S	S	W	Y	K	A	S	H	L	L	S	V	P	E	I	R	C	A	R	H	G	N	S	L	Y	L	A	E	G	S	G	A	I	M	S	L	L	E	L	H	I	P	H	E	T	I	Y	Y	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B					S	G	G	G	G	S			B		S	S					S	T	G	G	G	G	G	G						S			S	S						S		S	S											S			S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	L	F	S	N	E	M	N	P	P	Q	R	H	F	G	P	T	P	T	Q	F	L	N	S	V	V	Y	R	N	L	Q	A	E	V	P	C	K	D	G	F	V	Q	E	F	R	T	L	W	R	E	N	T	E	E	S	D	L	T	S	D	K	A	V	G	Y	I	T	S	V	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G			T	T												T	S								T	T				T	T	S	S										S		T	T	T	T		T	T	S											S
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820
Sequence	Y	R	S	V	S	L	L	H	C	D	I	E	I	P	P	G	S	N	Q	S	L	L	D	Q	L	A	T	N	L	S	L	I	A	M	H	S	V	R	E	G	G	V	V	I	V	K	I	L	Y	S	M	G	Y	Y	F	H	L	L	V	N	L	F	T	P	C	S	V	K	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T													T	T																																	S	S													T	T	T
	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890
Sequence	V	L	S	N	G	Y	A	C	R	G	D	M	E	C	Y	V	V	F	V	M	G	Y	L	G	G	P	T	F	V	N	E	V	V	R	M	A	K	T	L	I	Q	R	H	G	T	L	L	A	K	S	D	E	T	A	L	M	A	L	F	T	S	Q	K	Q	R	V	D	N	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G		S	S	S																															T	T		B	S
	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.	.	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960
Sequence	S	S	P	L	P	R	L	A	K	L	L	R	R	N	I	D	T	A	L	I	E	A	G	G	Q	P	V	R	P	F	C	A	E	S	L	V	N	I	T	Q	T	T	Q	V	I	A	S	H	I	D	T	V	I	R	S	V	I	Y	M	E	A	I	D	G	K	K	R	T	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S										T	T		T	T	T	T	T	S	T	T	T			B				G	G	G	G	G
	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.	.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030
Sequence	K	Q	C	T	R	Q	I	L	E	V	T	I	L	G	L	G	P	E	D	L	N	R	V	G	D	I	I	S	L	I	L	R	G	T	I	S	L	E	D	L	I	P	L	R	T	Y	L	K	M	S	T	C	P	K	Y	L	K	S	V	L	G	L	T	K	L	R	E	M	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S															S								S								S	S	S									T										T
	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.
Sequence	D	G	S	M	L	Y	L	T	R	A	Q	Q	K	F	Y	M	K	T	V	G	N	A	V	K	G	Y	Y	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S																						T		S