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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7yimA_

Fold library idPDB HeaderMoleculeTitle
c7yimA_2.60PDB header: metal binding proteinChain: A: PDB Molecule: alpha-fetoprotein;


Added to library: Sat Jan 21 12:39:36 2023
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SRTLHRNEYGIASILDSYQCTAEISLADLATIFFAQFVQEATYKEVSKMVKDALTAIEKPTGDEQSSGCL
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TT



GGGTS






STT

TSS

S


SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence ENQLPAFLEELCHEKEILEKYGHSDCCSQSEEGRHNCFLAHKKPTPASIPLFQVPEPVTSCEAYEEDRET
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TT

GGGGS
T

SS
TTS







 .........150.........160.........170.........180.........190.........200.........210
Sequence FMNKFIYEIARRHPFLYAPTILLWAARYDKIIPSCCKAENAVECFQTKAATVTKELRESSLLNQHACAVM
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Known secondary structure (DSSP) TT
SSS
TT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNFGTRTFQAITVTKLSQKFTKVNFTEIQKLVLDVAHVHEHCCRGDVLDCLQDGEKIMSYICSQQDTLSN
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Known secondary structure (DSSP)


SS
TT
T
TTTS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KITECCKLTTLERGQCIIHAENDEKPEGLSPNLNRFLGDRDFNQFSSGEKNIFLASFVHEYSRRHPQLAV
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Known secondary structure (DSSP) STTTGGGS
S





TTS
SS
SSSSTT

SSS

SSTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SVILRVAKGYQELLEKCFQTENPLECQDKGEEELQKYIQESQALAKRSCGLFQKLGEYYLQNAFLVAYTK
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Known secondary structure (DSSP) TTSS
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KAPQLTSSELMAITRKMAATAATCCQLSEDKLLACGEGAADIIIGHLCIRHEMTPVNPGVGQCCTSSYAN
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Known secondary structure (DSSP)
TTS
SSS
TTS


S
STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence RRPCFSSLVVDETYVPPAFSDDKFIFHKDLCQAQGVALQTMKQEFLINLVKQKPQITEEQLEAVIADFSG
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Known secondary structure (DSSP) T



SS






GGGS


TTTTT

S
TT

S
 .........570.........580.........590..
Sequence LLEKCCQGQEQEVCFAEEGQKLISKTRAALGV
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Known secondary structure (DSSP) SSSSSST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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