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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c7yi2D_ | 3.40 | PDB header: gene regulation | Chain: D: PDB Molecule: transcriptional regulatory protein rco1; |
Added to library: Sat Jun 17 14:33:48 2023 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | L | N | E | P | S | T | I | S | E | D | S | K | V | S | V | T | G | L | P | L | N | K | G | P | S | E | K | I | K | R | E | S | L | W | N | D | L | K | T | F | L | T | E | N | M | T | E | E | S | N | I | R | S | T | I | G | W | N | E | D | F | C | S | A | C | N | Q | S | G | S |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | G | G | G | G | T | T | S | T | T | T | T | S | S | T | T | T | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | F | L | C | C | D | T | C | P | K | S | F | H | F | L | C | L | D | P | P | I | D | P | N | N | L | P | K | G | D | W | H | C | N | E | C | K | F | K | I | F | I | N | N | S | M | A | T | L | K | K | I | E | S | N | F | I | K | Q | N | N | N | V | K | I | F | A | K | L | L | F |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | S | ![]() | ![]() | S | S | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | N | I | D | S | H | N | P | K | Q | F | Q | L | P | N | Y | I | K | E | T | F | P | A | V | K | T | G | S | R | G | Q | Y | S | D | E | N | D | K | S | Y | N | P | D | T | H | I | D | S | N | S | G | K | F | L | I | C | Y | K | C | N | Q | T | R | L | G | S | W | S | H | P | E |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | T | T | S | S | S | S | S | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | T | T | G | G | G | B | S | S | S | S | B | T | T | T | S | S | S | G | G |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | N | S | R | L | I | M | T | C | D | Y | C | Q | T | P | W | H | L | D | C | V | P | R | A | S | F | K | N | L | G | S | K | W | K | C | P | L | H | S | P | T | K | V | Y | K | K | Y | K | V | W | K | K | Q | R | L | I | N | K | K | N | Q | L | Y | Y | E | P | L | Q | K | I | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | G | B | T | T | T | B | T | T | T | T | T | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
Sequence | Y | Q | N | N | G | N | I | Q | I | I | N | Q | D | F | K | I | T | Q | I | D | E | N | S | I | K | Y | D | F | F | D | K | I | Y | K | S | K | M | V | Q | K | R | |||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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