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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7ye1A_

Fold library idPDB HeaderMoleculeTitle
c7ye1A_3.70PDB header: transcriptionChain: A: PDB Molecule: dna-directed rna polymerase subunit alpha;


Added to library: Sat Jan 21 13:09:30 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RNWNELIRPEKPQIETGADATRKARIVAEPLERGFGVTLGNALRRVLLSSLQGAAVTAIQIDGVVHEFSS
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Known secondary structure (DSSP)

S
S



SS



TTSSSSSS
TT
TT





TT
SSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LEGVREDVVDIVLNIKQLAVRMHAEGPKRMTLRATGPGPVTAGQIETPADIEILNPDHVLCTLDDGASVR
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Known secondary structure (DSSP)
SSBSS
SS



SSS




SSS

BTT




TT


TT
B


BSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence MEFTVNNGKGYVPADRNRPEDAPIGLIAVDALYSPVKRVAYRVEPTRLDYDKLILEVETNGAVTPVDAVA
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Known secondary structure (DSSP)



SS
B
TTSSSTTS

SS


B


S








TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YAARILQDQLQIFITFENPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNE
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Known secondary structure (DSSP) TTT
S


GGGGSBGGGS


T

B
SSTSTT

TT
 .........290.........300.......
Sequence IKEVLAGMGLHLGMDVPNWPPENIEDL
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Known secondary structure (DSSP) TT

SS
S
TTSS
SGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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