PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7ycaV_

Fold library id	PDB Header	Molecule	Title
c7ycaV_	2.94	PDB header: photosynthesis	Chain: V: PDB Molecule: chlorophyll a-b binding protein, chloroplastic;

Links to external resources
Added to library: Sat Apr 29 08:24:08 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D I Y P E F G T Y P G G G E S P I I P F G S E K N A E R E V I H G R W A M L G V T G A W A A E N G T G I P W F T A G T L C T P D D C T A V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S S
S S
S S
T S
S S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D K F P G A V A P L A P Y P S F W N V L I I E I V L V G A A E A Y R T G I S D S P F D D G L T V G D V N P G G R F D P L G L A E S G D L E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T
S S
S
T S S
S S
S S
T T
S
T T T S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . .

Sequence L K I K E L K H C R L S M F A W L G C I F Q A L A T Q E G P I A N W Q S H V A D P V H S N V L T N A A K G F G F Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T T S S T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	Y	P	E	F	G	T	Y	P	G	G	G	E	S	P	I	I	P	F	G	S	E	K	N	A	E	R	E	V	I	H	G	R	W	A	M	L	G	V	T	G	A	W	A	A	E	N	G	T	G	I	P	W	F	T	A	G	T	L	C	T	P	D	D	C	T	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S			T	T	S	S			S	S																																		S	S								T	S		S	S				T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	K	F	P	G	A	V	A	P	L	A	P	Y	P	S	F	W	N	V	L	I	I	E	I	V	L	V	G	A	A	E	A	Y	R	T	G	I	S	D	S	P	F	D	D	G	L	T	V	G	D	V	N	P	G	G	R	F	D	P	L	G	L	A	E	S	G	D	L	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T		S	S		S																										T	S	S			S	S		S	S			T	T		S			T	T	T	S		T	T						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Sequence	L	K	I	K	E	L	K	H	C	R	L	S	M	F	A	W	L	G	C	I	F	Q	A	L	A	T	Q	E	G	P	I	A	N	W	Q	S	H	V	A	D	P	V	H	S	N	V	L	T	N	A	A	K	G	F	G	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												S												S	S	T	T	S	S								T	T	T	T