PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7y9nA_

Fold library id	PDB Header	Molecule	Title
c7y9nA_	1.89	PDB header: virus protein/inhibitor	Chain: A: PDB Molecule: spike protein s2',5hb-h2;

Links to external resources
Added to library: Sat Aug 20 08:53:19 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E N Q K L I A N Q F N S A I G K I Q D S L S S T A S A L G K L Q D V V N Q N A Q A L N T L V K Q L G D I S G I N A S V V N I Q K E I D R L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E V A K N L N E S L I N Q K L I A N Q F N S A I G K I Q D S L S S T A S A L G K L Q D V V N Q N A Q A L N T L V K Q L S G D I S G I N A S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V N I Q K E I D R L N E V A K N L N E S L I D E N Q K L I A N Q F N S A I G K I Q D S L S S T A S A L G K L Q D V V N Q N A Q A L N T L V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G

. .

Sequence Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	N	Q	K	L	I	A	N	Q	F	N	S	A	I	G	K	I	Q	D	S	L	S	S	T	A	S	A	L	G	K	L	Q	D	V	V	N	Q	N	A	Q	A	L	N	T	L	V	K	Q	L	G	D	I	S	G	I	N	A	S	V	V	N	I	Q	K	E	I	D	R	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																			T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	V	A	K	N	L	N	E	S	L	I	N	Q	K	L	I	A	N	Q	F	N	S	A	I	G	K	I	Q	D	S	L	S	S	T	A	S	A	L	G	K	L	Q	D	V	V	N	Q	N	A	Q	A	L	N	T	L	V	K	Q	L	S	G	D	I	S	G	I	N	A	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G	G																																																					T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	N	I	Q	K	E	I	D	R	L	N	E	V	A	K	N	L	N	E	S	L	I	D	E	N	Q	K	L	I	A	N	Q	F	N	S	A	I	G	K	I	Q	D	S	L	S	S	T	A	S	A	L	G	K	L	Q	D	V	V	N	Q	N	A	Q	A	L	N	T	L	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	G	G	G	G
	.	.
Sequence	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)