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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7xzfB_

Fold library idPDB HeaderMoleculeTitle
c7xzfB_1.30PDB header: lyaseChain: B: PDB Molecule: fucoidan lyase;


Added to library: Sat Oct 1 11:47:31 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QTTTVYSLEDLLPYLKQDNVDVKLAPGTYNVNGFDVGEDRLFSTTPLFLFEGSNSTYDFTDVKLNINTVV
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Known secondary structure (DSSP)

SSGGGGG
SS

S
GGGBSTTSSB
SSSS

SS

TTGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTKFGNNEVNEIQILGNNNVLKNLKLEDIGTTAPSNRAQSIVIDGRDNRIEGFHLTIRGSYPYGYGDAFG
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Known secondary structure (DSSP) GGSSTTS

SSS


S



SS

SBS
S


BS
SSTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KGGGSVINHRKHSGVLIRGLRNHLKDCTIISRSYGHIVFMQAASYPTVEGCYIEGEMRSTDDMLAEEGTG
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Known secondary structure (DSSP) SSTT
SS

B

SBS
S
SSS
SSS
BS
S


TTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SPADKVDFMTVWGYKLPAGYMMSLQEGGIRAYNAGTTYIDGVEIQRATDNPTVLNCTIKNARTGVTLAHA
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Known secondary structure (DSSP)
TTTB
TTSSB

SS
SSS
S

TT


BS
S
SSS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NGTKYVEGCTVLGCENGYSIGSGTVVNCGADAIYGPVFKNTYGSDKGYNADITILPPSDAYYNGHDAVAY
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Known secondary structure (DSSP) BS

S
S
S


SS

SSS
S

STT
B



SS



TT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence IGGSNHNLTFRSEITEIPSNLKIMVSGDLQGLRVLHGSNPSQNNFAGTNIVLRNLTNFPVDLHSDSSNIT
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Known secondary structure (DSSP)







TT

SS



TTSGGGSSGGGSS

SS


TT
 .........430.........440...
Sequence VTSCDTDNITDNGTNNSIEAIDC
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Known secondary structure (DSSP) S
STT
SBS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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