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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7xt4B_

Fold library idPDB HeaderMoleculeTitle
c7xt4B_3.08PDB header: immune system/rnaChain: B: PDB Molecule: ramp superfamily protein;


Added to library: Sat Nov 12 11:09:06 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DMNITVELTFFEPYRLVEWFDWDARKKSHSAMRGQAFAQWTWKGKGRTAGKSFITGTLVRSAVIKAVEEL
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Known secondary structure (DSSP)
SS




SS
TTTS
SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LSLNNGKWEGVPCCNGSFQTDESKGKKPSFLRKRHTLQWQANNKNICDKEEACPFCILLGRFDNAGKVHE
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Known secondary structure (DSSP) TTTTT








SSSS


S



S





SSS


SSS

T
SSS

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence RNKDYDIHFSNFDLDHKQEKNDLRLVDIASGRILNRVDFDTGKAKDYFRTWEADYETYGTYTGRITLRNE
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Known secondary structure (DSSP)
SSS
S



SS

S
STTT
TTTSS
SSSS


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence HAKKLLLASLGFVDKLCGALCRIEVIKSEDHNDELRKQAEVIVEAFKQNDKLEKIRILADAIRTLRLHGE
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Known secondary structure (DSSP) TSTT

TT

TT
TTTTTS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GVIEKDELPDGKEERDKGHHLWDIKVQGTALRTKLKELWQSNKDIGWRKFTEMLGSNLYLIYKKETGGVS
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Known secondary structure (DSSP) S

S



TT
SS
SSSTT

BTTB
TTTS
S


 .........360.........370.........380.........390.........400.........410.........420
Sequence TRFRILGDTEYYSKDSEGSDLFIPVTPPEGIETKEWIIVGRLKAATPFYFGVQQPSDSIPGKEHTSFNIL
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Known secondary structure (DSSP)



TT


B















TT


SS
B



TTS

S




SB
 .........430.........440.........450.........460.........470.........480.........490
Sequence LDKENRYRIPRSALRGALRRDLRTAFGSGCNVSLGGQILCNCKVCIEMRRITLKDSVSDFSEPPEIRYRI
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Known secondary structure (DSSP) B
TTS
B
S





SS
SS


STT



S





 .........500.........510.........520.........530.........540.........550.........560
Sequence AKNPGTATVEDGSLFDIEVGPEGLTFPFVLRYRGHKFPEQLSSVIRYWEENDGKNGMAWLGGLDSTGKGR
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Known secondary structure (DSSP)
B
TTTSSB
TT

B
BT
SS

B

SS



GGGT
 .........570.........580.........590.........600.........610.........620.........630
Sequence FALKDIKIFEWDLNQKINEYIKERGMRGKEKELLEMGESSLPDGLIPYKFFEERECLFPYKENLKPQWSE
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Known secondary structure (DSSP) TTT
GGGTT


STT

TT





STT
SSTTTTSGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence VQYTIEVGSPLLTADTISALTEPGNRDAIAYKKRVYNDGNNAIEPEPRFAVKSETHRGIFRTAVGRRTGD
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Known secondary structure (DSSP)
S
B

B

SGGGGSTT

SB

B

SSSSS

SS

T
 .........710.........720.........730.........740.........750.........760.........770
Sequence LGKEDHEDCTCDMCIIFGNEHESSKIRFEDLELINGNEFEKLEKHIDHVAIDRFTGGALDKAKFDTYPLA
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Known secondary structure (DSSP) TT
S

TT




SSS

S



TTS
SS
B


TTT
S
B
 .........780.........790.........800.........810.........820.........830.........840
Sequence GSPKKPLKLKGRFWIKKGFSGDHKLLITTALSDIRDGLYPLGSKGGVGYGWVAGISIDDNVPDDFKEMIN
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Known secondary structure (DSSP)

SSS
TT

TTSS

SS
GGGT
S

TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence KTGPINNDYVHPGHQSPKQDHKNKNIYYPHYFLDSGSKVYREKDIITHEEFTEELLSGKINCKLETLTPL
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Known secondary structure (DSSP)







B



TTTTTTSSS


S


S



BSS


SSS

SSSSS
B
 .........920.........930.........940.........950.........960.........970.........980
Sequence IIPDTSDENGLKLQGNKPGHKNYKFFNINGELMIPGSELRGMLRTHFEALTKSCFAIFGEDSTKTLGGKL
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Known secondary structure (DSSP)

TT
SS
SS
TTTSTT


TT
T


SS







S
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence DKALHPCTGLSDGLCPGCHLFGTTDYKGRVKFGFAKYENGPEWLITRGNNPERSLTLGVLESPRPAFSIP
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Known secondary structure (DSSP)
STTS


SSSS
B


SSS

S

S

S


SSSSSSS

B







S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence DDESEIPGRKFYLHHNGWRIIRQKQLEIRETVQPERNVTTEVMDKGNVFSFDVRFENLREWELGLLLQSL
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Known secondary structure (DSSP) SSS








TT
SSSS
TTT



B
TT

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DPGKNIAHKLGKGKPYGFGSVKIKIDSLHTFKIDKIKRVPQSDIREYINKGYQKLIEWSGNNVLPQWHVI
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Known secondary structure (DSSP)


BTB

SS
TTTT





B



S





GGGS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence PHIDKLYKLLWVPFLNDSKLEPDVRYPVLNEESKGYIEGSDYTYKKLGDKDNLPYKTRVKGLTTPWSPWN
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Known secondary structure (DSSP) TB
TTSSS








SSSSSTT

TT


SSSSSSS
STT
BTT
 ...
Sequence PFQ
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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