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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7xc2D_

Fold library idPDB HeaderMoleculeTitle
c7xc2D_3.00PDB header: plant protein/inhibitorChain: D: PDB Molecule: avirulence factor;


Added to library: Sat Sep 24 13:42:34 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VNFPFPKKMITESNSKDIREYLASTFPFEQQSTILDSVKSIAKVQIDDRKAFDLQLKFRQENLAELKDQI
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S


GGGGSSS






 .........80.........90.........100.........110.........120.........130.........140
Sequence ILSLGANNGNQNWQKLLDYTNKLDELSNTKISPEEFIEEIQKVLYKVKLSTSKLYSQFNLSIQDFALQII
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Known secondary structure (DSSP) S
SS


S







 .........150.........160.........170.........180.........190.........200.........210
Sequence HSKYKSNQISQNDLLKLITEDEMLKILAKTKVLTYKMKYFDSASKMGINKYISTEMMDLDWQFSHYKTFN
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Known secondary structure (DSSP) TTSS
SSST
TTS

GGGGGGSGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence DALKKNKASDSSYLGWLTHGYSIKYGLSPNNERSMFFQDGRKYAELYAFSKSPHRKIIPGEHLKDLLAKI
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Known secondary structure (DSSP)
TTSS

SS

SSSS

GGGGTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence NKSKGIFLDQNALLDKRIYAFHELNTLETHFPGITSSFTDDLKSNYRKKMESVSLTCQVLQEIGNIHRFI
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Known secondary structure (DSSP) T
TTS
STTTT

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence ESKVPYHSSTEYGLFSIPKIFSIPIDYKHGEKENLVSYVDFLYSTAHERILQDNSINQLCLDPLQESLNR
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Known secondary structure (DSSP) GGGSTT

S
SS
TTSS
TTT






TTS


 .........430.
Sequence IKSNIPVFFNL
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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