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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7welA_

Fold library idPDB HeaderMoleculeTitle
c7welA_3.20PDB header: membrane proteinChain: A: PDB Molecule: sodium channel protein type 10 subunit alpha;


Added to library: Sat Aug 6 08:57:42 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HSWFSLFITVTILVNCVCMTRTDLPEKIEYVFTVIYTFEALIKILARGFDPWNWLDFSVITLAYVGTAID
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Known secondary structure (DSSP)
S



SS

TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LRGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVKKLADVTILTIFCLSVFALVGLQLFKGNLKNKCV
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Known secondary structure (DSSP)
S
SST
TTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KNDMAYSSHRKPDIYINKRGTSDPLLCGNGSDSGHCPDGYICLKTSDNPDFNYTSFDSFAWAFLSLFRLM
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Known secondary structure (DSSP)





SSSSS

B
B
TTS
SB



SSTTT



TT
S

SSSS


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TQDSWERLYQQTLRTSGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATWVKLKTILFGLVTDPF
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Known secondary structure (DSSP) TSS
STT

T

 .........290.........300.........310.........320.........330.........340.........350
Sequence AELTITLCIVVNTIFMAMEHHGMSPTFEAMLQIGNIVFTIFFTAEMVFKIIAFDPYYYFQKKWNIFDCII
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Known secondary structure (DSSP) TT

TT

TTS
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VTVSLLELGVAKKGSLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGK
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Known secondary structure (DSSP) S

TTTTGGGGGSGGGGGGGTTSS
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QLLGENYRNNRKNISAPHEDWPRWHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVL
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Known secondary structure (DSSP) TTSS
TT
SS
SS

SSTT

TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence GNLVVLNLFIALLLNSFFADVGWQVRKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKALL
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Known secondary structure (DSSP) TT

SGGG
STTGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence EYTDRVFTFIFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLISLTAKILEYSEVAPIKALRTLRALR
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Known secondary structure (DSSP)
TSSSSTT
SSSTTGGGGGGT
 .........640.........650.........660.........670.........680.........690.........700
Sequence PLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINYTDGEFSLVPLSIV
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Known secondary structure (DSSP) T
TT

SSS


TTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence NNKSDCKIQNSTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSREVNMQPKWEDNVYMYL
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Known secondary structure (DSSP)
BTTTSS

SS
SSSTSSS

STTB


TTSSGGG
 .........780.........790.........800.........810.........820.........830.........840
Sequence YFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKFQ
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Known secondary structure (DSSP) TS

SS











SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence GFVFDIVTRQAFDITIMVLICLNMITMMVETDDQSEEKTKILGKINQFFVAVFTGECVMKMFALRQYYFT
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Known secondary structure (DSSP) ST

TT

SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence NGWNVFDFIVVVLSIASLIFSAILKSLQSYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPA
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Known secondary structure (DSSP) SS



GGGSGGGGT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LFNIGLLLFLVMFIYSIFGMSSFPHVRWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPP
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Known secondary structure (DSSP) STTS


TT

SSSSSSSTTTTT

STT
 .........1060.........1070.........1080.........1090.........1100..
Sequence YCDPNLPNSNGTRGDCGSPAVGIIFFTTYIIISFLIMVNMYIAVILENFNVA
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Known secondary structure (DSSP) T

SS
SS
SSSSSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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