PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7uztC_

Fold library id	PDB Header	Molecule	Title
c7uztC_	1.86	PDB header: viral protein	Chain: C: PDB Molecule: capsid polyprotein vp90;

Links to external resources
Added to library: Sat Nov 12 10:55:13 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S Y P M T P S S L V L M A G Y F S G P E I G K Y M P L L F Q Q N T S K V T F R S G S H T I K I V S M V L V D R L M W L D K H F N Q Y T N E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B
T T S
S S S
T T
S
T T S
B
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D G V F G D V G N V F V D N D N V A K V I T M S G S S A P A N R G A T L M L C R A T K N I Q T F N F A A T V Y I P A Y K V V V L N V A Q W E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B T T B
T T
S
S S S S
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A N K T L T Y P A I P K D T Y F M V V T M G G A S F T I Q R Y V V Y N E G I G D G L E L P A F W G K Y L S Q L Y G F S W S S P T Y A C V T W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S T T S
S S G G G G G T T T B T S S S
S S S
S S

. . . .

Sequence E P I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Y	P	M	T	P	S	S	L	V	L	M	A	G	Y	F	S	G	P	E	I	G	K	Y	M	P	L	L	F	Q	Q	N	T	S	K	V	T	F	R	S	G	S	H	T	I	K	I	V	S	M	V	L	V	D	R	L	M	W	L	D	K	H	F	N	Q	Y	T	N	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T													B			T	T	S							S	S	S							T	T						S													T	T	S		B		S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	G	V	F	G	D	V	G	N	V	F	V	D	N	D	N	V	A	K	V	I	T	M	S	G	S	S	A	P	A	N	R	G	A	T	L	M	L	C	R	A	T	K	N	I	Q	T	F	N	F	A	A	T	V	Y	I	P	A	Y	K	V	V	V	L	N	V	A	Q	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	T	T	B									T	T														S			S	S										S	S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	N	K	T	L	T	Y	P	A	I	P	K	D	T	Y	F	M	V	V	T	M	G	G	A	S	F	T	I	Q	R	Y	V	V	Y	N	E	G	I	G	D	G	L	E	L	P	A	F	W	G	K	Y	L	S	Q	L	Y	G	F	S	W	S	S	P	T	Y	A	C	V	T	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										B		T	T										S						T	T						S			S	S						G	G	G	G	G	T	T	T	B	T	S	S	S		S	S	S							S	S
	.	.	.	.
Sequence	E	P	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S