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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7usmA_

Fold library idPDB HeaderMoleculeTitle
c7usmA_2.70PDB header: cell adhesionChain: A: PDB Molecule: integrin alpha-m;


Added to library: Sat Aug 20 09:03:46 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FNLDTENAMTFQENARGFGQSVVQLQGSRVVVGAPQEIVAANQRGSLYQCDYSTGSCEPIRLQVPVEAVN
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Known secondary structure (DSSP)

B

TT



TTTTSTTT
TT
TT

TTTT






SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence MSLGLSLAATTSPPQLLACGPTVHQTCSENTYVKGLCFLFGSNLRQQPQKHEMSQEGFSAAITSNGPLLS
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Known secondary structure (DSSP)

TTSTT
SS

SSSS





TT

TTS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TVGSYDWAGGVFLYTSKEKSTFINMTRVDSDMNDAYLGYAAAIILRNRVQSLVLGAPRYQHIGLVAMFRQ
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Known secondary structure (DSSP) TTTBSSSS





TTTTTT

BTSTTTTSTTTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence NTGMWESNANVKGTQIGAYFGASLCSVDVDSNGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGRARWQCDA
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Known secondary structure (DSSP) TT

STTS
BTS

SS
SSS


SSB


TT





 .........290.........300.........310.........320.........330.........340.........350
Sequence VLYGEQGQPWGRFGAALTVLGDVNGDKLTDVAIGAPGEEDNRGAVYLFHGTSGSGISPSHSQRIAGSKLS
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Known secondary structure (DSSP)

TTBTT

TTS



SSSSSS

TTT

TTT
SS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PRLQYFGQSLSGGQDLTMDGLVDLTVGAQGHVLLLRSQPVLRVKAIMEFNPREVARNVFECGKEAGEVRV
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Known secondary structure (DSSP) TT

STTS
SS
SSSSSS
TTB

SSSSB




 .........430.........440.........450.........460.........470.........480.........490
Sequence CLHVQKSTRDRLREGQIQSVVTYDLALDSGRPHSRAVFNETKNSTRRQTQVLGLTQTCETLKLQLPNCIE
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Known secondary structure (DSSP) SS

S

TTT

TTTSSS
S
TTTSSS
SS
SS

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence DPVSPIVLRLNFSLVGTPLSAFGNLRPVLAEDAQRLFTALFPFEKNCGNDNICQDDLSITFSFMSLDCLV
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Known secondary structure (DSSP)
TTS


BTTTTSB


TTS


B


SSSS







TT


B
 .........570.........580.........590.........600.........610.........620.........630
Sequence VGGPREFNVTVTVRNDGEDSYRTQVTFFFPLDLSYRKVSTWRLACESLKSTSCSINHPIFPENSEVTFNI
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Known secondary structure (DSSP) TTS
S

SS
S
B
TT







B


STT
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence TFDVDSKASLGNKLLLKANVTSENNMPRTNKTEFQLELPVKYAVYMVVTSHGVSTKYLNFTASENTSRVM
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Known secondary structure (DSSP)
TT



S
TT




GGGB




TTS





SS

 .........710.........720.........730.........740.........750.........760.........770
Sequence QHQYQVSNLGQRSLPISLVFLVPVRLNQTVIWDRPQVTFSENLSSTCHTKERLPSHSDFLAELRKAPVVN
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Known secondary structure (DSSP)
SS

TTSBS

SS





S
S


S
 .........780.........790.........800.........810.........820.........830.........840
Sequence CSIAVCQRIQCDIPFFGIQEEFNATLKGNLSFDWYIKTSHNHLLIVSTAEILFNDSVFTLLPGQGAFVRS
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Known secondary structure (DSSP) TTTS
TT

SS



SSS


TTT

TTGGGGS
 ........
Sequence QTETKVEP
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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