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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7um0A_

Fold library idPDB HeaderMoleculeTitle
c7um0A_3.80PDB header: transcriptionChain: A: PDB Molecule: dna-directed rna polymerase subunit;


Added to library: Sat Jul 9 08:40:02 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NYVSFDEQARDINIAFDKLFGRDDISHMNNFSINKRSYYNCLDQISDDLNLVLNKYNDLAYSLLEIRYNM
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Known secondary structure (DSSP)

TTTT
TS

TGGGG


S
TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ATKENYTHMEFYSDIERLFIKNEKLLNVISDIVEEEYDLDLNQASKGKKINIELQVTDNLNKIYLKSSVL
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Known secondary structure (DSSP)




TTT
TTT




TTTSSSS


TTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence MRILIPILCDFNCDDDINEVLVYDIFKEVIKSFDDGKKNALNKLYKIIYSRVFETKYSDVVIWTYLKNMS
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Known secondary structure (DSSP) S

S
TTT


TTTTTTTTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TDLMIIVKDYFKVIIKKIFPKLKHNSSVISYLDVVIKQKLKYLFTFKYPISYKPLKAETTDDEELSEQER
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Known secondary structure (DSSP)

TTTTS

SSS
SS


SS





SS
SS
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence MEINLLRNDQGNSIINECSIKQEIAKIKKKYNVTDEVMKEFINGRELNSIQIYLVKIYYSNKFKVNSNKN
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Known secondary structure (DSSP) TS



STT

TT



TTTT



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DIFYLLYGMTRELGEMNFSIIPEILSCAIAPNVRKMNNRKKLVDKIIHSDKYSYLLKSYLPIKNILDKNN
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Known secondary structure (DSSP) SS

S
B
SS






S
S


 .........430.........440.........450.........
Sequence VILQLMTIKNAKFMNKENKEVDFSTDHLAEEVLDMLLCI
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Known secondary structure (DSSP) TTTTS
BB
TT

B



T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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