Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7uk8A_

Fold library idPDB HeaderMoleculeTitle
c7uk8A_1.85PDB header: ligaseChain: A: PDB Molecule: putative acid--amine ligase ygic;


Added to library: Sat Feb 18 08:56:32 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHHHMERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKV
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


SS



TTT


S
BTTB


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) T
TT

GGGTT




SSSS


SS
S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TT
S
TT
B
SB




TTSSTTTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) GGG

TTS

TTS
B

S
TTSTTGGGGGGS

S
GGGGGTSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSRNVSIIENGKTIGPYGEEGMIVQQFHPLPKFGDSYMLIGS
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) STT
TT


TTS




SSSS




TT




S
STT




TT
 .........360.........370.........380...
Sequence WLVNDQPAGIGIREDRALITQDMSRFYPHIFVE
Predicted secondary structure










SS confidence
































Known secondary structure (DSSP) TTS
SS
SS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D