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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7uedM_

Fold library idPDB HeaderMoleculeTitle
c7uedM_3.00PDB header: immune systemChain: M: PDB Molecule: isoform 4 of mesothelin;


Added to library: Sat Feb 4 19:38:35 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KTACPSGKKAREIDESLIFYKKWELEACVDAALLATQMDRVNAIPFTYEQLDVLKHKLDELYPQGYPESV
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Known secondary structure (DSSP)

S

TT


SS
SGGGGGS
S
TGGGGGGS



TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence IQHLGYLFLKMSPEDIRKWNVTSLETLKALLEVNKGHEMSPQVATLIDRFVKGRGQLDKDTLDTLTAFYP
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Known secondary structure (DSSP) TT
GGGGGG

TT




TTTTTS


TS

ST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GYLCSLSPEELSSVPPSSIWAVRPQDLDTCDPRQLDVLYPKARLAFQNMNGSEYFVKIQSFLGGAPTEDL
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Known secondary structure (DSSP) TSGGGS
TTGGGGS
GGGGGG

GGGGTT

TT

TTTTGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence KALSQQNVSMDLATFMKLRTDAVLPLTVAEVQKLLGPHVEGLKAEERHRPVRDWILRQRQDDLDTLGLGL
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Known secondary structure (DSSP) TT




TTS
TT

GGGGGGGTTTSSSTTSBGGGSS

 .......
Sequence QGGIPNG
Predicted secondary structure






SS confidence






Known secondary structure (DSSP)


B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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