PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7udlA_

Fold library id	PDB Header	Molecule	Title
c7udlA_	2.15	PDB header: de novo protein	Chain: A: PDB Molecule: designed helical repeat protein (dhr) rpb_plp1_r6;

Links to external resources
Added to library: Sat Mar 25 11:15:31 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E E R I K Y V I T V V E Q I A K D A H R N G Q E E L A K L A E R T A E E A K K A T E R G E E E T L R I V Y V I V V V L Q I A L E A H R N G Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E E L A K L A L R T A E E A I K A T E R G E E E T L R I V Y V I V V V L Q I A L E A H R N G Q E E L A K L A L R T A E E A I K A T E R G E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E T L R I V Y V I V V V L Q I A L E A H R N G Q E E L A K L A L R T A E E A I K A T E R G E E E T L R I V Y V I V V V L Q I A L E A H R N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . .

Sequence Q E E L A K L A L R T A E E A I K A T E R G E E E T E R I V Y D I V V V L Q E A L E A H R N G E E E R A K K A L D E A R R R I E A T E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	E	R	I	K	Y	V	I	T	V	V	E	Q	I	A	K	D	A	H	R	N	G	Q	E	E	L	A	K	L	A	E	R	T	A	E	E	A	K	K	A	T	E	R	G	E	E	E	T	L	R	I	V	Y	V	I	V	V	V	L	Q	I	A	L	E	A	H	R	N	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T	T																						T																								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	E	L	A	K	L	A	L	R	T	A	E	E	A	I	K	A	T	E	R	G	E	E	E	T	L	R	I	V	Y	V	I	V	V	V	L	Q	I	A	L	E	A	H	R	N	G	Q	E	E	L	A	K	L	A	L	R	T	A	E	E	A	I	K	A	T	E	R	G	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					T		T	T																					T	T																						T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	T	L	R	I	V	Y	V	I	V	V	V	L	Q	I	A	L	E	A	H	R	N	G	Q	E	E	L	A	K	L	A	L	R	T	A	E	E	A	I	K	A	T	E	R	G	E	E	E	T	L	R	I	V	Y	V	I	V	V	V	L	Q	I	A	L	E	A	H	R	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T																						T																								T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Sequence	Q	E	E	L	A	K	L	A	L	R	T	A	E	E	A	I	K	A	T	E	R	G	E	E	E	T	E	R	I	V	Y	D	I	V	V	V	L	Q	E	A	L	E	A	H	R	N	G	E	E	E	R	A	K	K	A	L	D	E	A	R	R	R	I	E	A	T	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T		S																						T	T