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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7u5dA_

Fold library idPDB HeaderMoleculeTitle
c7u5dA_3.52PDB header: dna binding protein/dna/rnaChain: A: PDB Molecule: cas8/5;


Added to library: Sat Jun 24 09:05:16 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRQLRRYLAPYSAEIGVDGAEKMALVVLLNLTLKRDRVESLCDEGLARQLLSDEGHITNCLHTVRWLHTH
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Known secondary structure (DSSP)
TSTTS


B
TT
TTS
GGG
S
TT
T
GGGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLKYPDARVSGERLIINAPPLIPGVISSAGLPMRMGWAHDSSDINLAKLFGTSFRYRDDSTNLALQLVAR
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Known secondary structure (DSSP) TTTT
TT

S

B







TT
BSGGGS




S
TTTTTTT
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKTWEQALIGLGLTQQQLDIWCQLLASNLENNTFPTVVSPFSKQVRFLYQGNYCVVTPVVSHALLAQLQN
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Known secondary structure (DSSP)
TT

TTSS

S
SS

TTS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVHEKKLQCTYIHHDHPASVGSLVGALGGKVAVLDYPPPVNGQSLFDRSVFNDHVFIDALKHVISRPGLT
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Known secondary structure (DSSP) TT


SSGGGT
TTT









S
SSGGG


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RKQQRQLRLSALRYLRRQLAIWLGPIIEWRDEIVSSGSGGLELELITQPKKMLPELMLQVAGRFHLELQN
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Known secondary structure (DSSP) T



S
GGGGGGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence HSAGRRFAFHPALMAPIKSQILWLLRQLAYLHLSGLTVYDASALANPYLCGIPSLSALAGFCHDYERRLQ
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Known secondary structure (DSSP) STTGGGTTT
GGG


TTSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence SLIGQSVYFRGLAWYLGRYSLVTGKHLPEPSKSADPKSVSAIRRPGLLDGRYCDLGMDLIIEVHIPTGGS
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Known secondary structure (DSSP) TT
SS


S






SSSSS












SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LPFTTCLDLLRVALPARFAGGCLHPPSLYEEYNWCTVYQDKSTLFTVLSRLPRYGCWIYPSDADLRSFEE
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Known secondary structure (DSSP)

S

STT
S
GGG


TT
B
S
TTS
TT






S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LSEALALDRRLRPVATGFVFLEEPVERAGSIEGQHVYAESAIGTALCINPVEMRLAGKKRFFGAGFWQLN
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Known secondary structure (DSSP)
SSSS

B

TT
SSS


S
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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