PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7t14B_

Fold library id	PDB Header	Molecule	Title
c7t14B_	2.25	PDB header: viral protein	Chain: B: PDB Molecule: capsid protein p24;

Links to external resources
Added to library: Sat Oct 22 11:13:41 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P V Q Q I G G N Y V H L C L S P R T L N A W V K L I E E K K F G A E V V P G F Q A L S C G C T P Y D I N Q M L N C V G D H Q A A M Q I I R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T T T T
T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I I N E E A A D W D L Q H P Q P A P Q Q G Q L R E P S G S D I A G T T S S V D E Q I Q W M Y R Q Q N P I P V G N I Y R R W I Q L G L Q K C V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T S S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R M Y N P T N I L D V K Q G P K E P F Q S Y V D R F Y K S L R A E Q T D A A V K N A A T Q T L L I Q N A N P D C K L V L K G L G V N P T L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G
T T
T S
T T S
S S

. . . . . . . . .

Sequence E M L T A C Q G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	V	Q	Q	I	G	G	N	Y	V	H	L	C	L	S	P	R	T	L	N	A	W	V	K	L	I	E	E	K	K	F	G	A	E	V	V	P	G	F	Q	A	L	S	C	G	C	T	P	Y	D	I	N	Q	M	L	N	C	V	G	D	H	Q	A	A	M	Q	I	I	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																							T	T		T	T									T	T	T												T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	I	N	E	E	A	A	D	W	D	L	Q	H	P	Q	P	A	P	Q	Q	G	Q	L	R	E	P	S	G	S	D	I	A	G	T	T	S	S	V	D	E	Q	I	Q	W	M	Y	R	Q	Q	N	P	I	P	V	G	N	I	Y	R	R	W	I	Q	L	G	L	Q	K	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S							T	T												T	S	S													S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	M	Y	N	P	T	N	I	L	D	V	K	Q	G	P	K	E	P	F	Q	S	Y	V	D	R	F	Y	K	S	L	R	A	E	Q	T	D	A	A	V	K	N	A	A	T	Q	T	L	L	I	Q	N	A	N	P	D	C	K	L	V	L	K	G	L	G	V	N	P	T	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S		G	G	G					T	T																																			T	S									T	T	S		S	S
	.	.	.	.	.	.	.	.	.
Sequence	E	M	L	T	A	C	Q	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T