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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7shmB_

Fold library idPDB HeaderMoleculeTitle
c7shmB_3.14PDB header: lipid transportChain: B: PDB Molecule: atp-binding cassette sub-family d member 1;


Added to library: Sat Nov 6 11:12:56 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KAGMNRVFLQRLLWLLRLLFPRVLCRETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAFGWQ
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Known secondary structure (DSSP)

SSS
SSSSSTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLQWLLIALPATFVNSAIRYLEGQLALSFRSRLVAHAYRLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVA
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Known secondary structure (DSSP) TTTTTSSSTTTTT
SSS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEA
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Known secondary structure (DSSP) SSSS


TT
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence RRKGELRYMHSRVVANSEEIAFYGGHEVELALLQRSYQDLASQINLILLERLWYVMLEQFLMKYVWSASG
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Known secondary structure (DSSP) TTTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLMVAVPIIELVSERTEAFTIARNLLTAAADAIERIMSSYKEVTELAGYTARVHEMFQVFEDVQRCHFKR
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Known secondary structure (DSSP)

STTTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence KIRGQVVDVEQGIICENIPIVTPSGEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYGGVL
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Known secondary structure (DSSP)




SS
S
TT




SS



TTSSSTTTTSSS


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence YKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSVEDMQRKGYSEQDLEAILDVVHLHHILQREGGWEAMCDW
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Known secondary structure (DSSP)

TTT
SS



SS
SS
SS
T

TT

TTTTSSSSTT

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence KDVLSGGEKQRIGMARMFYHRPKYALLDQCTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLL
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Known secondary structure (DSSP) S
S

SSTTSSS
TT



STTSGGG
SS
 .........570..
Sequence QFDGEGGWKFEK
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Known secondary structure (DSSP)

SSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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