PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7sbeA_

Fold library id	PDB Header	Molecule	Title
c7sbeA_	2.65	PDB header: rna binding protein	Chain: A: PDB Molecule: telomerase reverse transcriptase;

Links to external resources
Added to library: Sat Sep 24 13:44:49 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L T I D W N S A L Y H K I R P Q D Y K N I I E T D Q G L L I A E I F P K I S E S S K T P R S L N F A L N N L K P I L Y E L I R A H E R F S Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S
T T
G G G G S
S S T T T T T
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R H I I N N I C P K S D T F Y S S P K S V I K L L I V C V R K T F P L D L L G S N S N Y S V L S K A I A I L V K K P L H S K I L F D E L C K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S S
S
S S
S S
B S T T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G L R V K D V K W L E T R R L P A G E Q T Q K I P Y Y D V K N R Q A L L Y K L F F W I L S C Y V P K L L S T F F Y V T E L S S T V D I V Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
G G G
S S
T
S S S

. . . . . . . . . 220 . . . . . . . .

Sequence R H D T W K T M S Q P F L K S Y F R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	T	I	D	W	N	S	A	L	Y	H	K	I	R	P	Q	D	Y	K	N	I	I	E	T	D	Q	G	L	L	I	A	E	I	F	P	K	I	S	E	S	S	K	T	P	R	S	L	N	F	A	L	N	N	L	K	P	I	L	Y	E	L	I	R	A	H	E	R	F	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B								S	S	S			T	T		G	G	G	G	S			S									S	T	T	T	T	T		T	T																									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	H	I	I	N	N	I	C	P	K	S	D	T	F	Y	S	S	P	K	S	V	I	K	L	L	I	V	C	V	R	K	T	F	P	L	D	L	L	G	S	N	S	N	Y	S	V	L	S	K	A	I	A	I	L	V	K	K	P	L	H	S	K	I	L	F	D	E	L	C	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S				S	S	S	S																		S							S																	S		S	S				B	S	T	T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	L	R	V	K	D	V	K	W	L	E	T	R	R	L	P	A	G	E	Q	T	Q	K	I	P	Y	Y	D	V	K	N	R	Q	A	L	L	Y	K	L	F	F	W	I	L	S	C	Y	V	P	K	L	L	S	T	F	F	Y	V	T	E	L	S	S	T	V	D	I	V	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T	S		G	G	G							S	S																												T																S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	R	H	D	T	W	K	T	M	S	Q	P	F	L	K	S	Y	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)