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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7rhlC_

Fold library idPDB HeaderMoleculeTitle
c7rhlC_3.03PDB header: transport proteinChain: C: PDB Molecule: cgmp-gated cation channel alpha-1;


Added to library: Sat Nov 6 09:11:19 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VVIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWLILDYVSDIVYLIDMFVRTRTGYLE
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Known secondary structure (DSSP)

B
TTS
TB

 .........80.........90.........100.........110.........120.........130.........140
Sequence QGLLVKEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYP
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Known secondary structure (DSSP) TT


STS
GGGG
TT
GGGGGGGGGG
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTLTTIGE
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Known secondary structure (DSSP)
TTSSSSS


TTSTTTT
TTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence TPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVI
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Known secondary structure (DSSP) S



STT

 .........290.........300.........310.........320.........330.........340.........350
Sequence KWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDY
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Known secondary structure (DSSP) TT

S
TTS
TSSSSSS

T

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFC
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Known secondary structure (DSSP)
TT



SS


SSSS

TT

TTTTS

TT
TTTTS

SSS
 .........430.........440.........450.........460.........470.........480.........
Sequence LSKDDLMEALTEYPDAKTMLEEKGKQILMKEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVE
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Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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