PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7rdtA_

Fold library id	PDB Header	Molecule	Title
c7rdtA_	2.10	PDB header: hydrolase, lyase	Chain: A: PDB Molecule: isoform 3 of endonuclease iii-like protein 1;

Links to external resources
Added to library: Sat Jan 1 08:33:27 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V W E P Q D W Q Q Q L V N I R A M R N K K T E L N F S S P K V R R Y Q V L L S L M L S S Q T K D Q V T A G A M Q R L R A R G L T V D S I L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T D D A T L G K L I Y P V G F W R S K V K Y I K Q T S A I L Q Q H Y G G D I P A S V A E L V A L P G V G P K M A H L A M A V A W G T V S G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S T T S T T S
S S T T S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A V D T H V H R I A N R L R W T K K A T K S P E E T R A A L E E W L P R E L W H E I N G L L V G F G Q Q T C L P V H P R C H A C L N Q A L C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
S S T T S
G G G T T T S
S S S
G G G
T T G G G

. . . . .

Sequence P A A Q G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	W	E	P	Q	D	W	Q	Q	Q	L	V	N	I	R	A	M	R	N	K	K	T	E	L	N	F	S	S	P	K	V	R	R	Y	Q	V	L	L	S	L	M	L	S	S	Q	T	K	D	Q	V	T	A	G	A	M	Q	R	L	R	A	R	G	L	T	V	D	S	I	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T																					S	S																T	T																			S						T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	D	D	A	T	L	G	K	L	I	Y	P	V	G	F	W	R	S	K	V	K	Y	I	K	Q	T	S	A	I	L	Q	Q	H	Y	G	G	D	I	P	A	S	V	A	E	L	V	A	L	P	G	V	G	P	K	M	A	H	L	A	M	A	V	A	W	G	T	V	S	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T	S	T	T																			S	T	T	S			S	S					T	T	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	V	D	T	H	V	H	R	I	A	N	R	L	R	W	T	K	K	A	T	K	S	P	E	E	T	R	A	A	L	E	E	W	L	P	R	E	L	W	H	E	I	N	G	L	L	V	G	F	G	Q	Q	T	C	L	P	V	H	P	R	C	H	A	C	L	N	Q	A	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T		S	S	S			S	S										T	T	S		G	G	G	T	T													T	S		S	S	S			G	G	G		T	T	G	G	G
	.	.	.	.	.
Sequence	P	A	A	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)