PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7qxsP_

Fold library id	PDB Header	Molecule	Title
c7qxsP_	3.91	PDB header: rna binding protein	Chain: P: PDB Molecule: protection of telomeres protein 1;

Links to external resources
Added to library: Sat Mar 5 09:02:17 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T N Y I Y T P L N Q L K G G T I V N V Y G V V K F F K P P Y L S K G T D Y C S V V T I V D Q T N V K L T C L L F S G N Y E A L P I I Y K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T S
S S
S S S S
T T
S S G G G S
S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G D I V R F H R L K I Q V Y K K E T Q G I T S S G F A S L T F I P R T S S K Y F N F L K L C D V Q P M Q Y F D L T C Q L L G K A E V D G A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
B
S
S S
G G G
S S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F L L K V W D G T R T P F P S W R V L I Q D L V L E G D L S H I H R L Q N L T I D I L V Y D N H V H V A R S L K V G S F L R I Y S L H T K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
B
T T T
G G G S T T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence L S L E F H L H G G T S Y G R G I R V L P E S N S D V D Q L K K D L E S A N L T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S
G G G
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	N	Y	I	Y	T	P	L	N	Q	L	K	G	G	T	I	V	N	V	Y	G	V	V	K	F	F	K	P	P	Y	L	S	K	G	T	D	Y	C	S	V	V	T	I	V	D	Q	T	N	V	K	L	T	C	L	L	F	S	G	N	Y	E	A	L	P	I	I	Y	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B			T	T	S			S	S																			S	S	S	S										T	T											S	S	G	G	G	S					S	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	D	I	V	R	F	H	R	L	K	I	Q	V	Y	K	K	E	T	Q	G	I	T	S	S	G	F	A	S	L	T	F	I	P	R	T	S	S	K	Y	F	N	F	L	K	L	C	D	V	Q	P	M	Q	Y	F	D	L	T	C	Q	L	L	G	K	A	E	V	D	G	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T														T	T																		B		S		S	S						G	G	G			S	S																S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	L	L	K	V	W	D	G	T	R	T	P	F	P	S	W	R	V	L	I	Q	D	L	V	L	E	G	D	L	S	H	I	H	R	L	Q	N	L	T	I	D	I	L	V	Y	D	N	H	V	H	V	A	R	S	L	K	V	G	S	F	L	R	I	Y	S	L	H	T	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			S	S		B							T	T	T												G	G	G	S							T	T							T			T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	L	S	L	E	F	H	L	H	G	G	T	S	Y	G	R	G	I	R	V	L	P	E	S	N	S	D	V	D	Q	L	K	K	D	L	E	S	A	N	L	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B						S	S		G	G	G								T	T	S