Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7qqdA_

Fold library idPDB HeaderMoleculeTitle
c7qqdA_2.70PDB header: dna binding proteinChain: A: PDB Molecule: nuclear factor 1 x-type;


Added to library: Sat Jan 21 12:37:44 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKD
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP)
GGGS
TSS


TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYK
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) B
TSS




BB


TTS



SSSSS







TTGGGG
 .........150.........160..
Sequence SPQCSNPGLCVQPHHIGVTIKE
Predicted secondary structure














SS confidence





















Known secondary structure (DSSP)
TT
S
TTTB

TTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D