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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7qe5A_

Fold library idPDB HeaderMoleculeTitle
c7qe5A_4.70PDB header: transport proteinChain: A: PDB Molecule: sialic acid trap transporter permease protein siat;


Added to library: Sat Jul 30 09:00:12 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKYINKLEEWLGGALFIAIFGILIAQILSRQVFHSPLIWSEELAKLLFVYVGMLGISVAVRKQEHVFIDF
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Known secondary structure (DSSP)
GGGGGTSS

TTT





 .........80.........90.........100.........110.........120.........130.........140
Sequence LTNLMPEKIRKFTNTFVQLLVFICIFLFIHFGIRTFNGASFPIDALGGISEKWIFAALPVVAILMMFRFI
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Known secondary structure (DSSP)

TT




GGGT


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence QAQTLNFKTGKSYLPATFFIISAVILFAILFFAPDWFKVLRISNYIKLGSSSVYVALLVWLIIMFIGVPV
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Known secondary structure (DSSP) TTS
S


TTTSGGGG


GGGTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence GWSLFIATLLYFSMTRWNVVNAATEKLVYSLDSFPLLAVPFYILTGILMNTGGITERIFNFAKALLGHYT
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Known secondary structure (DSSP)
SSTTT
STTTTTST
 .........290.........300.........310.........320.........330.........340.........350
Sequence GGMGHVNIGASLLFSGMSGSALADAGGLGQLEIKAMRDAGYDDDICGGITAASCIIGPLVPPSIAMIIYG
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Known secondary structure (DSSP) TSST

SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VIANESIAKLFIAGFIPGVLITLALMAMNYRIAKKRGYPRTPKATREQLCSSFKQSFWAILTPLLIIGGI
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Known secondary structure (DSSP) T










 .........430.........440.........450.........460.........470.........480.........490
Sequence FSGLFSPTESAIVAAAYSVIIGKFVYKELTLKSLFNSCIEAMAITGVVALMIMTVTFFGDMIAREQVAMR
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Known secondary structure (DSSP) TTSS
T




TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence VADVFVAVADSPLTVLIMINALLLFLGMFIDALALQFLVLPMLIPIAMQFNIDLIFFGVMTTLNMMVGIL
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Known secondary structure (DSSP) TT


TTS
TT

T
 .........570.........580.........590.........600.........610......
Sequence TPPMGMALFVVARVGNMSVSTVTKGVLPFLIPVFVTLVLITIFPQIITFVPNLLIP
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Known secondary structure (DSSP) STTT
TS
TTT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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