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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7qd8B_

Fold library idPDB HeaderMoleculeTitle
c7qd8B_3.60PDB header: recombinationChain: B: PDB Molecule: transposase for transposon tn4430;


Added to library: Sat Oct 29 10:58:16 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVKQLLSEAQRNELMDLSRLTEWDLVTFHTFSKHDLHLILKHRRGYNRLGFALQLVLIRYPGWSLTEYKD
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Known secondary structure (DSSP)




S


GGGGTTT





TTSSS
S
GGG
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IPQYVVAYVASQLQIPPEEFLVYAKRGNTLWEHLGEIRTEYGYQNFSSEYKETLLQFLVQQAMDNNNTLY
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Known secondary structure (DSSP)

SSS

TTSSST

B





 .........150.........160.........170.........180.........190.........200.........210
Sequence LIEITISTLRKMKVILPAMYVIEDIVWEAKQQADQKVYSILHDGLVQEQKDQLDALLLPTINGKSPLAWL
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Known secondary structure (DSSP) TTB



TT

TTSS

BTTB
 .........220.........230.........240.........250.........260.........270.........280
Sequence KDVPAQPSPESFLKVIDRLQFVQKIGLTIDTTKINTNRLRQLARLGSKYEPYAFRRFNEVKRYSMLVSFL
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Known secondary structure (DSSP)


SS

TS




SSSS
S
SSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEITQDLIDYAIEIHDRLMMNLQTKGKKEQDEIQQANGKKLNEKILQFITVCGTLIEAKETGKDAFAALD
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Known secondary structure (DSSP) TTSTTTGGGT

 .........360.........370.........380.........390.........400.........410.........420
Sequence EVMSWNEMVESVEEAKQLSDYLDLLNTRYSYVRRYAPTLLRSLHFRATKSGEPVLQALDTIHELNETGKR
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Known secondary structure (DSSP) TTS
S

TTTTS



B
TTT


 .........430.........440.........450.........460.........470.........480.........490
Sequence KVPHGAPLHFVSNRINRHYYELAALTELRNHIRSGDIFVSGSRHHKAFDDYLIPYDEWNEVSNIPNGLTA
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Known secondary structure (DSSP)


TT


TTS




TT
B

TT
SSS

S

TTS

S
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PLKAEDYITDRINRLNEHLEWLSHVERLDRGTPEEAKAFSKLLHSMLPRIKLTDLLIEVASWTGFHDQFI
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Known secondary structure (DSSP)
SS

TTS





SS

T
GGGG

 .........570.........580.........590.........600.........610.........620.........630
Sequence HASTNQSPDQEEQNIVLATLMAMGTNIGLTKMAEATPGISYRQMANASQWRMYDDAMVRAQSILVNFQKE
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Known secondary structure (DSSP)
SSS




TT

SSS

TTSS

TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence QKLSSYWSAYHVKVITTNARDALHVLDGLLHHETDLKIEEHYTDTAGYTDQVFALTHLLGFRFAPLLKGK
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Known secondary structure (DSSP) SGGGGG



SS
S
TT



S

SS



STT






 .........710.........720.........730.........740.........750.........760.........770
Sequence INVKLIKENYEDIRRLAYSVQTGKVSSALIMGKLGSYARQNKLATALGEMGRIEKTLFTLDYISNKAVRR
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Known secondary structure (DSSP)

TTGGGTTSS

SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence RVQKGLNKGEAINALARIIFFGQRGEFRERALQDQLQRASALNIIINAISVWNTVYMEKAVEELKARGEF
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Known secondary structure (DSSP)

SS
STTTT
TTTT

 .........850.........860.....
Sequence REDLMPYAWPLGWEHINFLGEYKFE
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Known secondary structure (DSSP) S
S

TT

S


SS
S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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