PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7qcdB_

Fold library id	PDB Header	Molecule	Title
c7qcdB_	8.00	PDB header: recombination	Chain: B: PDB Molecule: structural maintenance of chromosomes protein 6;

Links to external resources
Added to library: Sat Sep 24 15:01:53 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L E E S P S G Y I K K V I L R N F M C H E H F E L E L G S R L N F I V G N N G S G K S A I L T A I T I G L G A K A S E T N R G S S L K D L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S S S B T T B S S
S S S
T T S
T T
G G G T S S
S S
T T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R E G C Y S A K I I L H L D N S K Y G A Y Q Q G I F G N E I I V E R I I K R D G P A S F S L R S E N G K E I S N K K K D I Q T V V D Y F S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S B S
S S T T T S
S S
S S S S
T T S
S S T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V S N P M C F L S Q D A A R S F L T A S T S Q D K Y S H F M K G T L L Q E I T E N L L Y A S A I H D S A Q E N M A L H L E N L K S L K A E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S
T S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence E D A K K R E L N Q T S D L N E R K M L L Q A K S L W I D V A H N T D A C K N L E N E I S G I Q Q K V D E V T E K I R N R Q E K I E R Y T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence D G T T I E A Q I D A K V I R D V K S R F E K E K S N Q A E A Q S N I D Q G R K K V D A L N K T I A H L E E E L T K E K D Q M R Q E L E Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence E K A N E K L R E V N N S L V V S L Q D V K N E E R D I Q H E R E S E L R T I S R S I Q N K K V E L Q N I A K G N D T F L M N F D R N M D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S
T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L L R T I E Q R K N E F E T P A I G P L G S L V T I R K G F E K W T R S I Q R A I S S S L N A F V V S N P K D N R L F R D I M R S C G I R S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S S
T T
T T T T T T
S S T
S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence N I P I V T Y C L S Q F D Y S K G R A H G N Y P T I V D A L E F S K P E I E C L F V D L S R I E R I V L I E D K N E A R N F L Q R N P V N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
B S S S
B T T T T
G G G
B
S
B T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence N M A L S L R D R R S G F Q L S G G Y R L D T V T Y Q D K I R L K V N S S S D N G T Q Y L K D L I E Q E T K E L Q N I R D R Y E E K L S E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T T T
S S
S
B S S
T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence R S R L K E I D G R L K S T K N E M R K T N F R M T E L K M N V G K V V D T G I L N S K I N E R K N Q E Q A I A S Y E A A K E E L G L K I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S
T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence Q I A Q E A Q P I L A L V E A Q D E L Q Q L K E D I N S R Q S K I Q K Y K D D T I Y Y E D K K K V Y L E N I K K I E V N V A A L K E G I Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence Q I Q N A C A F C S K E R I E N V D L P D T Q E E I K R E L D K V S R M I Q K A E K S L G Q E E V I A L F E K C R N K Y K E G Q K K Y M E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T S
S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence D E A L N R L H N S L K A R D Q N Y K N A E K G T C F D A D M D F R A S L K V R K F S G N L S F I K D T K S L E I Y I L T T N D E K A R N V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T T T
S S S S S G

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence D T L S G G E K S F S Q M A L L L A T W K P M R S R I I A L D Q F D V F M D Q V N R K I G T T L I V K K L K D I A R T Q T I I I T P Q D I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G S
T T S S
S
S
G G G S
T T T
S
S S

. . . . . . . . . 990 . . . . . . . .

Sequence K I A D I D S S G V S I H R M R D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	E	E	S	P	S	G	Y	I	K	K	V	I	L	R	N	F	M	C	H	E	H	F	E	L	E	L	G	S	R	L	N	F	I	V	G	N	N	G	S	G	K	S	A	I	L	T	A	I	T	I	G	L	G	A	K	A	S	E	T	N	R	G	S	S	L	K	D	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B	S	S			S						S	B	T	T	B	S	S						S	S	S								T	T	S												T	T				G	G	G	T	S	S		S	S		T	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	E	G	C	Y	S	A	K	I	I	L	H	L	D	N	S	K	Y	G	A	Y	Q	Q	G	I	F	G	N	E	I	I	V	E	R	I	I	K	R	D	G	P	A	S	F	S	L	R	S	E	N	G	K	E	I	S	N	K	K	K	D	I	Q	T	V	V	D	Y	F	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T													S	S	B	S		S	S	T	T	T	S		S	S									S	S	S	S								T	T	S					S	S												T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	S	N	P	M	C	F	L	S	Q	D	A	A	R	S	F	L	T	A	S	T	S	Q	D	K	Y	S	H	F	M	K	G	T	L	L	Q	E	I	T	E	N	L	L	Y	A	S	A	I	H	D	S	A	Q	E	N	M	A	L	H	L	E	N	L	K	S	L	K	A	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T	T	S											T	S														T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	D	A	K	K	R	E	L	N	Q	T	S	D	L	N	E	R	K	M	L	L	Q	A	K	S	L	W	I	D	V	A	H	N	T	D	A	C	K	N	L	E	N	E	I	S	G	I	Q	Q	K	V	D	E	V	T	E	K	I	R	N	R	Q	E	K	I	E	R	Y	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	G	T	T	I	E	A	Q	I	D	A	K	V	I	R	D	V	K	S	R	F	E	K	E	K	S	N	Q	A	E	A	Q	S	N	I	D	Q	G	R	K	K	V	D	A	L	N	K	T	I	A	H	L	E	E	E	L	T	K	E	K	D	Q	M	R	Q	E	L	E	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	K	A	N	E	K	L	R	E	V	N	N	S	L	V	V	S	L	Q	D	V	K	N	E	E	R	D	I	Q	H	E	R	E	S	E	L	R	T	I	S	R	S	I	Q	N	K	K	V	E	L	Q	N	I	A	K	G	N	D	T	F	L	M	N	F	D	R	N	M	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																							T	T		S						S		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	L	R	T	I	E	Q	R	K	N	E	F	E	T	P	A	I	G	P	L	G	S	L	V	T	I	R	K	G	F	E	K	W	T	R	S	I	Q	R	A	I	S	S	S	L	N	A	F	V	V	S	N	P	K	D	N	R	L	F	R	D	I	M	R	S	C	G	I	R	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		S	S		S	S														T	T		T	T	T											T	T	T					S	S															T		S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	I	P	I	V	T	Y	C	L	S	Q	F	D	Y	S	K	G	R	A	H	G	N	Y	P	T	I	V	D	A	L	E	F	S	K	P	E	I	E	C	L	F	V	D	L	S	R	I	E	R	I	V	L	I	E	D	K	N	E	A	R	N	F	L	Q	R	N	P	V	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															G	G	G			B	S	S	S		B	T	T	T	T																		G	G	G		B				S													B	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	N	M	A	L	S	L	R	D	R	R	S	G	F	Q	L	S	G	G	Y	R	L	D	T	V	T	Y	Q	D	K	I	R	L	K	V	N	S	S	S	D	N	G	T	Q	Y	L	K	D	L	I	E	Q	E	T	K	E	L	Q	N	I	R	D	R	Y	E	E	K	L	S	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S	S							T	T	T									S	S			S		B	S	S		T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	S	R	L	K	E	I	D	G	R	L	K	S	T	K	N	E	M	R	K	T	N	F	R	M	T	E	L	K	M	N	V	G	K	V	V	D	T	G	I	L	N	S	K	I	N	E	R	K	N	Q	E	Q	A	I	A	S	Y	E	A	A	K	E	E	L	G	L	K	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																															G	G	G	S						T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	I	A	Q	E	A	Q	P	I	L	A	L	V	E	A	Q	D	E	L	Q	Q	L	K	E	D	I	N	S	R	Q	S	K	I	Q	K	Y	K	D	D	T	I	Y	Y	E	D	K	K	K	V	Y	L	E	N	I	K	K	I	E	V	N	V	A	A	L	K	E	G	I	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Q	I	Q	N	A	C	A	F	C	S	K	E	R	I	E	N	V	D	L	P	D	T	Q	E	E	I	K	R	E	L	D	K	V	S	R	M	I	Q	K	A	E	K	S	L	G	Q	E	E	V	I	A	L	F	E	K	C	R	N	K	Y	K	E	G	Q	K	K	Y	M	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S	S						T	T	S				S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	D	E	A	L	N	R	L	H	N	S	L	K	A	R	D	Q	N	Y	K	N	A	E	K	G	T	C	F	D	A	D	M	D	F	R	A	S	L	K	V	R	K	F	S	G	N	L	S	F	I	K	D	T	K	S	L	E	I	Y	I	L	T	T	N	D	E	K	A	R	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																								T	S									T	T	T	T									S	S	S	S	S				G
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	D	T	L	S	G	G	E	K	S	F	S	Q	M	A	L	L	L	A	T	W	K	P	M	R	S	R	I	I	A	L	D	Q	F	D	V	F	M	D	Q	V	N	R	K	I	G	T	T	L	I	V	K	K	L	K	D	I	A	R	T	Q	T	I	I	I	T	P	Q	D	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S																		T	T	S	S		S						S		G	G	G	S																T	T	T			S								S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.
Sequence	K	I	A	D	I	D	S	S	G	V	S	I	H	R	M	R	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T				S	S	S