PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7qatA_

Fold library id	PDB Header	Molecule	Title
c7qatA_	2.40	PDB header: ligase	Chain: A: PDB Molecule: cyclodipeptide synthase;

Links to external resources
Added to library: Sat Oct 1 15:16:00 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E L H K N D I E L K K Y N I G V A I S L G N K W F S I D N I E K L V K W S L L H T K E Y V I I Y I A D S I K L S D S H A E E V A I R Y G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
T T
T T
S S
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L F I K I K E R V S L S F S Q D E Q A K I I Y A T W S D I A D S K Y K E K V K Y L Y N L Y D K N I N F K N Y I E N F V K E W V S K E K R T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F N N N E I N K F G R Y I L E E L P L L M V Q V K A R G V L F E A Y V Y P Y K T R I T E F V G L L Q K G E I F P E I K T N I L D N H P K I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S S
T T S S S
S
B

. . . . .

Sequence L E V R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	L	H	K	N	D	I	E	L	K	K	Y	N	I	G	V	A	I	S	L	G	N	K	W	F	S	I	D	N	I	E	K	L	V	K	W	S	L	L	H	T	K	E	Y	V	I	I	Y	I	A	D	S	I	K	L	S	D	S	H	A	E	E	V	A	I	R	Y	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S								T	T		T	T																		S	S														S	S									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	F	I	K	I	K	E	R	V	S	L	S	F	S	Q	D	E	Q	A	K	I	I	Y	A	T	W	S	D	I	A	D	S	K	Y	K	E	K	V	K	Y	L	Y	N	L	Y	D	K	N	I	N	F	K	N	Y	I	E	N	F	V	K	E	W	V	S	K	E	K	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S						T	T																																												T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	N	N	N	E	I	N	K	F	G	R	Y	I	L	E	E	L	P	L	L	M	V	Q	V	K	A	R	G	V	L	F	E	A	Y	V	Y	P	Y	K	T	R	I	T	E	F	V	G	L	L	Q	K	G	E	I	F	P	E	I	K	T	N	I	L	D	N	H	P	K	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						B					T	T									S	S													T	T	S	S	S										S		B
	.	.	.	.	.
Sequence	L	E	V	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)