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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7q46A_

Fold library idPDB HeaderMoleculeTitle
c7q46A_2.46PDB header: protein bindingChain: A: PDB Molecule: e3 ubiquitin-protein ligase herc2;


Added to library: Sat Nov 19 14:27:24 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG
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Known secondary structure (DSSP)



TT
TTSS
SSS

TTTTS

GGGTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK
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Known secondary structure (DSSP)
SSS
GGGTTS

TT
STTS


GGGTT
SSS



GGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA
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Known secondary structure (DSSP) TS

SSTT



GGGTT
SSS



GGGTTS

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL
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Known secondary structure (DSSP) TTS


GGGTTSSSSS


GGGTTS

SSTTS


GGGTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE
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Known secondary structure (DSSP) SSSS



GGGTT


SSTTS


TTSTT
SSSS


SS
T
 .........360.........
Sequence GQKITRVACGSSHSVAWTT
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Known secondary structure (DSSP) T


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

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