Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7pmkQ_

Fold library idPDB HeaderMoleculeTitle
c7pmkQ_3.20PDB header: replicationChain: Q: PDB Molecule: dna polymerase epsilon catalytic subunit a;


Added to library: Sat Nov 13 08:42:40 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TWEVLQYKDSGEPGVLEVFVTINGKVQNITFHIPKTIYMKFKSQTMPLLIEKSSASLPNQLFKITLPESV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)



SSTTTT
SS







B



 .........80.........90.........100.........110.........120.........130.........140
Sequence FLEEKENCTSIFNDENVLGVFEGTITPHQRAIMDLGASVGFEMKDLSMGFSMDIGYLLHFPEFFSLFKSW
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TTSS
TTSSSSSSTT

T
S


GGG










TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GDTITILVINASSLGQIYKQMFEKKKGKIETYSYLVDINFEFVYFKLYRRLSQETTKLKEERGLQFLLLL
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)
S


TTTTT







TT
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSPFITKLLGTIRLLNQMPIVKLSTLLKKLVNHVLSSGSWISHLIKLSQYSNIPICNLRLDSMDYIIDVL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)

SS

S
TTS




TT

TTTS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YARKLKKENIVLWWNEKAPLPDHGGIQNDFDLNTSWIMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTIL
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TTB




SSSSS


SGGGGS










S


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence TSAEFVHDAFSNDALNVLRGMLKEWWDEALKENSTADLLVNSLASWVQNPNAKLFDGLLRYHVHNLTKKA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)




SSS

TT
TT
TTSTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence LLQLVNEFSALGSTIVYADRNQILIKTNKYSPENCYAYSQYMMKAVRTNPMFSYLDLNIKRYWDLLIWMD
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TT
TT
S


TSGGGTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence KFNFSGLACTAVSQWQLKKFLSPIYQPEFEDWMMIILDSMLKTKQSYLKLNNSLNGFSHLFSKPLMKRVK
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TT

TS
TTTT

TTTTGGGGT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KLFKNQQEFILDPQYEADYVIPVLPGSHLNVKNPLLELVKSLCHVMLLSKSTILEIRTLRKELLKIFELR
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TT
TTTS



TTB



S
T
TT
GGGT

 .........640.........650.........660.........670.........680.........690.........700
Sequence EFAKVAEFKDPSLSLVVPDFLCEYCFFISDIDFCKAAPESIFSCVRCHKAFNQVLLQEHLIQKLRSDIES
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) TT
TTTS


SB


TTTTTTTS
B
SSS

B

 .........710.........720.........730.........740.........750.........760......
Sequence YLIQDLRCSRCHKVKRDYMSAHCPCAGAWEGTLPRESIVQKLNVFKQVAKYYGFDILLSCIADLTI
Predicted secondary structure




















SS confidence

































































Known secondary structure (DSSP) T

TTT

B

SSS
SS
TTS

SS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions