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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7pklL_

Fold library idPDB HeaderMoleculeTitle
c7pklL_2.35PDB header: immune systemChain: L: PDB Molecule: trastuzumab light chain vhh fusion;


Added to library: Sat Sep 10 11:50:12 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQLVESGGGLVQAGDSLTLSCAASGTFSSVAMGWFRQAPGKERKFVANISWNGDSTYYTDSVKGRFTISR
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 .........80.........90.........100.........110.........120.........130.........140
Sequence DNAKNTVYLQMSSLKPEDTAVYYCAADVRWTGDGHRADYWGQGTQVTVSSGDIQMTQSPSSLSASVGDRV
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Known secondary structure (DSSP) TTTT

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STT

 .........150.........160.........170.........180.........190.........200.........210
Sequence TITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQ
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 .........220.........230.........240.........250.........260.........270.........280
Sequence QHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS
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 .........290.........300.........310.........320.........330.....
Sequence QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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