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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7p9aA_

Fold library idPDB HeaderMoleculeTitle
c7p9aA_1.50PDB header: oxidoreductaseChain: A: PDB Molecule: short-chain acyl-coa dehydrogenase;


Added to library: Sat Jul 16 09:07:59 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKHLTEEQKLTLDMVRDVATREIAPRALELDEKSLFPEYARDLFAKLGLLNPLLPAAYGGTEMGVLTLAL
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Known secondary structure (DSSP)




TTGGGTT


T
S
TTS
GGGT




 .........80.........90.........100.........110.........120.........130.........140
Sequence ILEELGRVCASTALLLIAQTDGMLPIIHGGSPELKERYLRRFAGESTLLTALAATEPAAGSDLLAMKTRA
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Known secondary structure (DSSP)
TT

GGGSTT





BTTBSS
GGG


 .........150.........160.........170.........180.........190.........200.........210
Sequence VRQGDKYVINGQKCFITNGSVADVIVVYAYTDPEKGSKGISAFVVEKGTPGLVYGRNESKMGMRGSINSE
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Known secondary structure (DSSP) TTTTTT
SS
GGGGGGSTT
TT


SS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFFENMEVPAENIIGAEGTGFANLMQTLSTNRVFCAAQAVGIAQGALDIAVRHTQDRVQFGKPIAHLAPV
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Known secondary structure (DSSP) GGGSSTT

TTGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QFMVADMATAVEASRLLTRKAAELLDDGDKKAVLYGSMAKTMASDTAMRVTTDAVQVLGGSGYMKENGVE
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Known secondary structure (DSSP) TT
TTGGGGGSGGGS
 .........360.........370.........380
Sequence RMMRDAKLTQIYTGTNQITRMVTGRALLFP
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Known secondary structure (DSSP) TTSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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