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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7oseD_

Fold library idPDB HeaderMoleculeTitle
c7oseD_3.00PDB header: membrane proteinChain: D: PDB Molecule: cytochrome bd-ii ubiquinol oxidase subunit 1;


Added to library: Sat Nov 20 12:26:51 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINFALGVATGL
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Known secondary structure (DSSP)

TS

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence TMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSA
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Known secondary structure (DSSP)

TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGR
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Known secondary structure (DSSP) S

STTTT

T
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ERNVALRSFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQER
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Known secondary structure (DSSP)
SS
T

S


SS




BTTTTB
 .........290.........300.........310.........320.........330.........340.........350
Sequence NAFALKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDL
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Known secondary structure (DSSP)
SS
TTSSSSS




TT


TT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRW
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Known secondary structure (DSSP)
S
SSS

TS

TT
STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence VLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVY
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Known secondary structure (DSSP) TSTTT
SBTTTB
TTTT

S

 .........500...
Sequence LMQKYARLGPSAM
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Known secondary structure (DSSP)
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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