Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7n88A_

Fold library idPDB HeaderMoleculeTitle
c7n88A_3.70PDB header: membrane protein/transport proteinChain: A: PDB Molecule: lactoferrin-binding protein b;


Added to library: Sat Dec 4 08:59:26 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VNRPAVGAAMRLLRRNTAFHREDGTAIPDSKQAEEKLSFKEGDVLFLYGSKGNKLQQLKSEIHKRDSDVE
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP)




S







S
SSSSS
SSS

S






SS





S

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence IRTSEKENKKYGYEFVDAGYVYTKNGKDEIEQNSGGKRFTHRFGYDGFVYYSGERPSQSLPSAGTVKYFG
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)
B
SGGGT
SS






TTS

S


SB
SS


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NWQYMTDAKRHRTGKAVASDDLGYITFYGNDIGATSYAAKDADDREKHPAEYTVDFDKKILKGELIKNQY
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


S
SSSS


TTTSSBSTTTTTSS

BSTTB

SBTTB

TTTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence VQKKNDPKKPLTIYNITADLNGNRFTGSAKVNTEVKTRHADKEYLFFHTDADQRLEGGFFGDNGEELAGR
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)
SSTTS



TT
S
TTTTTTTS
S
BTT
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FISNDNGVFGVFAGKQKTNASGTNPAMPFGKHTKILDSLKISVDFEVSTMPDFGHPDSKEKTIDLADGRK
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)
TTT

S




SS

SSSSS


















TTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence MTVSACCDFLTYVKLGRIKTERKGRDIDLFLKGIRTAEADIPKTGTAHYTGTWEARIGEPIQWDNKADKA
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)



S

SS

B








BTTS

SSS


SSS



GGGGSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AKAEFDVDFGNKSISGTLTEQNGVEPAFRIENGVIEGNGFHATAADNLLVTGGFYGPQAAELGGTIFNKD
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S

TTTT

SSSSSTTS




B
SS
B





S



SBTTTS
SS
 .........500.........510.........520.........530..
Sequence GKSLGITEDIENEVENEADVGEQLEPEVKPQFGVVFGAKKDN
Predicted secondary structure


































SS confidence









































Known secondary structure (DSSP) SS
SSSS

S
SSBSSSSSS
B
S









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions