PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7lljB_

Fold library id	PDB Header	Molecule	Title
c7lljB_	3.15	PDB header: immune system	Chain: B: PDB Molecule: t cell receptor delta variable 3;

Links to external resources
Added to library: Sat Nov 20 08:35:39 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S D K V T Q S S P D Q T V A S G S E V V L L C T Y D T V Y S N P D L F W Y R I R P D Y S F Q F V F Y G D N S R S E G A D F T Q G R F S V K H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S
S S
T T
S S
T T S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I L T Q K A F H L V I S P V R T E D S A T Y Y C A T R L W L G D P H T D K L I F G K G T R V T V E P N I Q N P D P A V Y Q L R D S K S S D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S S
G G G
S S G G G
S
S S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S V C L F T D F D S Q T N V S Q S K D S D V Y I T D K C V L D M R S M D F K S N S A V A W S N K S D F A C A N A F N N S I I P E D T F F P S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S
S S T T
T T T T
S T T
T T T T T T T S
S S
B

. .

Sequence P E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	D	K	V	T	Q	S	S	P	D	Q	T	V	A	S	G	S	E	V	V	L	L	C	T	Y	D	T	V	Y	S	N	P	D	L	F	W	Y	R	I	R	P	D	Y	S	F	Q	F	V	F	Y	G	D	N	S	R	S	E	G	A	D	F	T	Q	G	R	F	S	V	K	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S							T	T												S		S	S										T	T											S	S						T	T	S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	L	T	Q	K	A	F	H	L	V	I	S	P	V	R	T	E	D	S	A	T	Y	Y	C	A	T	R	L	W	L	G	D	P	H	T	D	K	L	I	F	G	K	G	T	R	V	T	V	E	P	N	I	Q	N	P	D	P	A	V	Y	Q	L	R	D	S	K	S	S	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T							S	S			G	G	G													S	S	G	G	G							S											S	S												T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	V	C	L	F	T	D	F	D	S	Q	T	N	V	S	Q	S	K	D	S	D	V	Y	I	T	D	K	C	V	L	D	M	R	S	M	D	F	K	S	N	S	A	V	A	W	S	N	K	S	D	F	A	C	A	N	A	F	N	N	S	I	I	P	E	D	T	F	F	P	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			T	T	S						S	S	T	T												T	T	T	T												S	T	T			T	T	T	T	T	T	T	S				S	S		B
	.	.
Sequence	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)