PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7kpjF_

Fold library id	PDB Header	Molecule	Title
c7kpjF_	2.10	PDB header: immune system	Chain: F: PDB Molecule: gram_pos_anchoring domain-containing protein;

Links to external resources
Added to library: Sat Jan 22 08:27:44 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q N V K I N Y Y D E D A E K Q V A E V P V Q V S I D T S C V N M A I L T R Y M P E G Y A L V S S D C I I R D G Y V Y V S V K K D V E I R E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T
S B
T
T T
B
B T T S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V L H I T F E T P N G E V V T T E T V T A E G A D G E D A V F R L G V D F N L P T G Y K L S N D R D Q V T E I T I P F G S T G G H T M V V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T
T T T T
T T
T T S
S T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K G D L S S I V K I Q F V D A E N N D E V V A G G D Y F V D G D G D G I F H T R E I T E W V P E G Y E L Q E V G D F Q V E L Y K E T P L Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T T
T T
S S G G G T G G G
T T
S
S S G G G S S S

. . . . .

Sequence S V T K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	N	V	K	I	N	Y	Y	D	E	D	A	E	K	Q	V	A	E	V	P	V	Q	V	S	I	D	T	S	C	V	N	M	A	I	L	T	R	Y	M	P	E	G	Y	A	L	V	S	S	D	C	I	I	R	D	G	Y	V	Y	V	S	V	K	K	D	V	E	I	R	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	T												T	T		S	B									T			T	T									B		B	T	T									S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	H	I	T	F	E	T	P	N	G	E	V	V	T	T	E	T	V	T	A	E	G	A	D	G	E	D	A	V	F	R	L	G	V	D	F	N	L	P	T	G	Y	K	L	S	N	D	R	D	Q	V	T	E	I	T	I	P	F	G	S	T	G	G	H	T	M	V	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S														T	T							T	T	T	T					T	T					T	T	S				S						T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	G	D	L	S	S	I	V	K	I	Q	F	V	D	A	E	N	N	D	E	V	V	A	G	G	D	Y	F	V	D	G	D	G	D	G	I	F	H	T	R	E	I	T	E	W	V	P	E	G	Y	E	L	Q	E	V	G	D	F	Q	V	E	L	Y	K	E	T	P	L	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S													T	T	T	T	T												T	T		S	S				G	G	G	T	G	G	G			T	T					S		S				S	G	G	G	S	S	S
	.	.	.	.	.
Sequence	S	V	T	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)