PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7jwbD_

Fold library id	PDB Header	Molecule	Title
c7jwbD_	6.00	PDB header: viral protein/immune system	Chain: D: PDB Molecule: autonomous human heavy chain variable domain;

Links to external resources
Added to library: Sat Oct 10 09:23:50 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E V Q L V E S G G G L V Q P G G S L R L S C A A S G F R I Y S Y Y S Y I G W V R R A P G K G E E L V A R I Y P S S G Y T Y Y A D S V K G R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
S G G G T
T T
T T T T
T T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T I S A D T S K N T A Y L Q M N S L R A E D T A V Y Y C A R W D F A G S S G L D Y W G Q G T L V T V S S E V Q L V E S G G G L V Q P G G S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S
G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R L S C A A S G F R I Y S Y Y S Y I G W V R R A P G K G E E L V A R I Y P S S G Y T Y Y A D S V K G R F T I S A D T S K N T A Y L Q M N S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T T T
T T
T T T T
T T T T T T T T T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence R A E D T A V Y Y C A R W D F A G S S G L D Y W G Q G T L V T V S S E V Q L V E S G G G L V Q P G G S L R L S C A A S G F R I Y S Y Y S Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
B
T T S
S S
T T T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence G W V R R A P G K G E E L V A R I Y P S S G Y T Y Y A D S V K G R F T I S A D T S K N T A Y L Q M N S L R A E D T A V Y Y C A R W D F A G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T
T T T T T T T T T T
S
G G G

. . . . . . . . . 360 . . . . . .

Sequence S G L D Y W G Q G T L V T V S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	V	Q	L	V	E	S	G	G	G	L	V	Q	P	G	G	S	L	R	L	S	C	A	A	S	G	F	R	I	Y	S	Y	Y	S	Y	I	G	W	V	R	R	A	P	G	K	G	E	E	L	V	A	R	I	Y	P	S	S	G	Y	T	Y	Y	A	D	S	V	K	G	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S										S	S		S	G	G	G	T										T	T											T	T	T	T						T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	I	S	A	D	T	S	K	N	T	A	Y	L	Q	M	N	S	L	R	A	E	D	T	A	V	Y	Y	C	A	R	W	D	F	A	G	S	S	G	L	D	Y	W	G	Q	G	T	L	V	T	V	S	S	E	V	Q	L	V	E	S	G	G	G	L	V	Q	P	G	G	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T								S			G	G	G																																												T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	L	S	C	A	A	S	G	F	R	I	Y	S	Y	Y	S	Y	I	G	W	V	R	R	A	P	G	K	G	E	E	L	V	A	R	I	Y	P	S	S	G	Y	T	Y	Y	A	D	S	V	K	G	R	F	T	I	S	A	D	T	S	K	N	T	A	Y	L	Q	M	N	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S		T	T	T	T	T										T	T											T	T	T	T						T	T	T	T	T	T							T	T	T	T								S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	A	E	D	T	A	V	Y	Y	C	A	R	W	D	F	A	G	S	S	G	L	D	Y	W	G	Q	G	T	L	V	T	V	S	S	E	V	Q	L	V	E	S	G	G	G	L	V	Q	P	G	G	S	L	R	L	S	C	A	A	S	G	F	R	I	Y	S	Y	Y	S	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																				B																								T	T	S										S	S		T	T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	W	V	R	R	A	P	G	K	G	E	E	L	V	A	R	I	Y	P	S	S	G	Y	T	Y	Y	A	D	S	V	K	G	R	F	T	I	S	A	D	T	S	K	N	T	A	Y	L	Q	M	N	S	L	R	A	E	D	T	A	V	Y	Y	C	A	R	W	D	F	A	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T											T	T	T	T						T	T	T	T	T	T							T	T	T	T								S			G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Sequence	S	G	L	D	Y	W	G	Q	G	T	L	V	T	V	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B