PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7jmrA_

Fold library id	PDB Header	Molecule	Title
c7jmrA_	1.67	PDB header: lyase	Chain: A: PDB Molecule: pea pathogenicity protein 2;

Links to external resources
Added to library: Sat Feb 20 08:22:29 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L D P H S K C Y S H I N G S A E E L L D R L A V S E L C K G W P V Y R D A S E W K N Y R S L F T E D A T V W T T W S G P R P V D E F I T I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B
S S
T T
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K A G K E Q G V F I X H R E C G T L V E L S P Q Q G R A I G K X K A T I T Q R F S F P D A I E F D V D C D C R F I F F C E K D T A S G A W K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A K Y V K L F Y E K D K V V S V D G H Q A P K F T K D E L A K Y P Q G Y R Y L G A A Q A R L G Y D I D L Q L P T S S G Q L W D R X Y G E X E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
T S
T T S T T
S S S

. . . . . . . . . 220 . . . .

Sequence N W L G G N K V D L F W E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	D	P	H	S	K	C	Y	S	H	I	N	G	S	A	E	E	L	L	D	R	L	A	V	S	E	L	C	K	G	W	P	V	Y	R	D	A	S	E	W	K	N	Y	R	S	L	F	T	E	D	A	T	V	W	T	T	W	S	G	P	R	P	V	D	E	F	I	T	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			B		S	S																									T	T							T	T										T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	A	G	K	E	Q	G	V	F	I	X	H	R	E	C	G	T	L	V	E	L	S	P	Q	Q	G	R	A	I	G	K	X	K	A	T	I	T	Q	R	F	S	F	P	D	A	I	E	F	D	V	D	C	D	C	R	F	I	F	F	C	E	K	D	T	A	S	G	A	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																G	G	G	T																																						T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	K	Y	V	K	L	F	Y	E	K	D	K	V	V	S	V	D	G	H	Q	A	P	K	F	T	K	D	E	L	A	K	Y	P	Q	G	Y	R	Y	L	G	A	A	Q	A	R	L	G	Y	D	I	D	L	Q	L	P	T	S	S	G	Q	L	W	D	R	X	Y	G	E	X	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S	S												T	S		T	T	S										T	T										S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	N	W	L	G	G	N	K	V	D	L	F	W	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T