PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7ji0B_

Fold library id	PDB Header	Molecule	Title
c7ji0B_	2.95	PDB header: dna binding protein	Chain: B: PDB Molecule: positive transcriptional regulator mutr family;

Links to external resources
Added to library: Sat Oct 10 08:53:33 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T K T E S F A N L V Q Y I R K Q Y S L Q N I N N I Q S L L S D S S N Y T L D P F E K T M V K S I L H T M D S S I I P S D D E L L Q L A D Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T T T T T T S S
T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F K V E K W G Y Y E I I L L G N C V R T I D Y N S V F L L T K E M L N N Y N K T N K R I V T Q L A I N C L I L S I D M E E F T N C F Y L I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T T T T S
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence E I K A L L D N E L N F Y E Q T V F L Y A T G Y F E F K R W Q S T S G I E K M K Q A I Q V L D I L G E D N L K L H Y T I H F D K L I N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T
T T
S S T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	K	T	E	S	F	A	N	L	V	Q	Y	I	R	K	Q	Y	S	L	Q	N	I	N	N	I	Q	S	L	L	S	D	S	S	N	Y	T	L	D	P	F	E	K	T	M	V	K	S	I	L	H	T	M	D	S	S	I	I	P	S	D	D	E	L	L	Q	L	A	D	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T															T	T						T	T	T	T	T	T	T	S	S																T	T	T		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	K	V	E	K	W	G	Y	Y	E	I	I	L	L	G	N	C	V	R	T	I	D	Y	N	S	V	F	L	L	T	K	E	M	L	N	N	Y	N	K	T	N	K	R	I	V	T	Q	L	A	I	N	C	L	I	L	S	I	D	M	E	E	F	T	N	C	F	Y	L	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		S	S											T	T	T	T	T	S													T	T																								T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	E	I	K	A	L	L	D	N	E	L	N	F	Y	E	Q	T	V	F	L	Y	A	T	G	Y	F	E	F	K	R	W	Q	S	T	S	G	I	E	K	M	K	Q	A	I	Q	V	L	D	I	L	G	E	D	N	L	K	L	H	Y	T	I	H	F	D	K	L	I	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	T	T																						T																			T	T		S	S														T