Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7fjpB_

Fold library idPDB HeaderMoleculeTitle
c7fjpB_3.00PDB header: membrane proteinChain: B: PDB Molecule: polyamine-transporting atpase 13a2;


Added to library: Sat Mar 11 10:44:34 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IPLLLFRWKPLWGEGSLEPSPQSQAEDGRSQAAVGAVPEKDTALHKSEEAVSVGQKRVLRYYLFQGQRYI
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)





SSSS



SSTTTS




GGG
S




S









SSS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence WIETQQAFYQVSLLDHGRSCDDVHRSRHGLSLQDQMVRKAIYGPNVISIPVKSYPQLLVDEALNPYYGFQ
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) TTTTTTTTTTT

TTTTTT
TT













SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AFSIALWLADHYYWYALCIFLISSISICLSLYKTRKQSQTLRDMVKLSMRVCVCRPGGEEEWVDSSELVP
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) TT
TTS







SSS

TTTTS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDCLVLPQEGGLMPCDAALVAGECMVNESSLTGESIPVLKTALPEGCAETHRRHTLFCGTLILQARAYVG
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) T

SS

B

S
B
TTTT


S







STTGGG
TT



B
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PHVLAVVTRTGFCTAKGGLVSSILHPRPINFKFYKHSMKFVAALSVLALLGTIYSIFILYRNRVPLNEIV
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) SS
TTTSTTTTTSS



SS
SSS
STTT

SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IRALDLVTVVVPPALPAAMTVCTLYAQSRLRRQGIFCIHPLRINLGGKLQLVCFDKTGTLTEDGLDVMGV
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TS
TTTTB

S
GGGSTTGGG
S





B
S

 .........430.........440.........450.........460.........470.........480.........490
Sequence VPLKGQAFLPLVPEPRRLPVGPLLRALATCHALSRLQDTPVGDPMDLKMVESTGPQLQVPVSVLHRFPFS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
SSS




BSSTTSS
SSTTTTS


TTS
TT






 .........500.........510.........520.........530.........540.........550.........560
Sequence SALQRMSVVVAWPGATQPEAYVKGSPELVAGLCNPETVPTDFAQMLQSYTAAGYRVVALASKPLPTRDTV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TTTT
TT
SS

S
TTTS
TTTTT



TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence EGDLSLLGLLVMRNLLKPQTTPVIQALRRTRIRAVMVTGDNLQTAVTVARGCGMVAPQEHLIIVHATGQP
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) SSS


B
TTTT

SS
TTSS
TT





SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence ASLEFLPMESSRHLALSGPTFGIIVKHFPKLLPKVLVQGTVFARMAPEQKTELVCELQKLQYCVGMCGDG
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP)










TTTTT
S

TTTTT


S
 .........710.........720.........730.........740.........750.........760.........770
Sequence ANDCGALKAADVGISLSQAEASVVSPFTSSMASIECVPMVIREGRCSLDTSFSVFKYMALYSLTQFISVL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) GGGSS
S
SS

TT
SB
SSSGGGTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence ILYTINTNLGDLQFLAIDLVITTTVAVLMSRTGPALVLGRVRPPGALLSVPVLSSLLLQMVLVTGVQLGG
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) GGG



STTTTTSTT
S


SS

S





SSSTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence YFLTLAQPWFVPLNRTVAAPDNLPNYENTVVFSLSSFQYLILAAAVSKGAPFRRPLYTNVPFLVALALLS
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TT
TT





SS
SSSS


TS


SSSS

TTS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence SVLVGLVLVLLQGPLALRNITDTGFKLLLLGLVTLNFVGAFMLESVLDQCLPACSKKRFKQLERELAEQP
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) TT




SGGG





STTTTS






SS
 ...
Sequence WPP
Predicted secondary structure


SS confidence


Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions