PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7ekqI_

Fold library id	PDB Header	Molecule	Title
c7ekqI_	3.60	PDB header: structural protein	Chain: I: PDB Molecule: atp-dependent clp protease proteolytic subunit;

Links to external resources
Added to library: Sat Oct 23 08:34:09 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y P E G R P L F L P E A E R F G N P P D L P S L L L Q Q R V I Y I S M P F L P S V T E L V V A Q C Y Y L D F D D R N R Q R P I Y V Y L N S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T S S
S S T T
S
T T T T T S
S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G C I N D K G Q A I S A D N E F Y A I W A A L G F T R A P L Y T G V T W K A Q N Q A A V L L S A G Q K G H R Y S F P H A K I S T A P P V M N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T B
S S S S B S S
T T T T S S S
B S S T T S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R V F G Q A V D A Q L Q A N E L D Y A T K Y Y A A I L A R S T G K D L E T C Q K Q Y L S R K R Y F S V K E A Y E E G L V D K L V P G F M L N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S S
S T S
S
T T

. . . . . . .

Sequence R F R K M Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	P	E	G	R	P	L	F	L	P	E	A	E	R	F	G	N	P	P	D	L	P	S	L	L	L	Q	Q	R	V	I	Y	I	S	M	P	F	L	P	S	V	T	E	L	V	V	A	Q	C	Y	Y	L	D	F	D	D	R	N	R	Q	R	P	I	Y	V	Y	L	N	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T	T	S	S				S	S								T	T						S				T	T	T												T	T	S		S	S			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	C	I	N	D	K	G	Q	A	I	S	A	D	N	E	F	Y	A	I	W	A	A	L	G	F	T	R	A	P	L	Y	T	G	V	T	W	K	A	Q	N	Q	A	A	V	L	L	S	A	G	Q	K	G	H	R	Y	S	F	P	H	A	K	I	S	T	A	P	P	V	M	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	B		S	S	S	S	B	S	S		T	T										T	T	S	S	S											B	S	S						T	T	S		T	T						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	V	F	G	Q	A	V	D	A	Q	L	Q	A	N	E	L	D	Y	A	T	K	Y	Y	A	A	I	L	A	R	S	T	G	K	D	L	E	T	C	Q	K	Q	Y	L	S	R	K	R	Y	F	S	V	K	E	A	Y	E	E	G	L	V	D	K	L	V	P	G	F	M	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																										T	S	S	S						S							T	S			S			T	T
	.	.	.	.	.	.	.
Sequence	R	F	R	K	M	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)