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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7eeiA_

Fold library idPDB HeaderMoleculeTitle
c7eeiA_3.60PDB header: viral proteinChain: A: PDB Molecule: replicase;


Added to library: Sat Nov 20 08:34:29 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GKTERELLAMVSSIQINWSVTESVFPPFSREMFDRFRSSPPDSEYITRIVSRCLINSQEKLINSSFFAEG
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Known secondary structure (DSSP)




STT







SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NDKALRFSKNAEECSLAVERALNQYRAEDNLRDLNDHSSTIQLPPWLSYHDVDGKDLCPLQGLDVRGDHP
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Known secondary structure (DSSP)

S
S



TT



SB
S



B



SSS


TT


-
 .........150.........160.........170.........180.........190.........200.........210
Sequence MCNLWREVVTSANLEEIERMHDDAAAELEFALSGVKDRPDERNRYHRVHLNMGSDDSVYIAALGVNGKKH
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Known secondary structure (DSSP) TT
TTTT
S



-
SS


-



-

SSS


TTTS


-

-
 .........220.........230.........240.........250.........260.........270.........280
Sequence KADTLVQQMRDRSKQPFSPDHDVDHISEFLSACSSDLWATDEDLYNPLSCDKELRLAAQRIHQPSLSERG
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Known secondary structure (DSSP)
--

--

S
B
TTS


SSTT


S
SS
GGG
TT
TT



-
 .........290.........300.........310.........320.........330.........340.........350
Sequence FNEIITEHYKFMGSRIGSWCQMVSLIGAELSASVKQHVKPNYFVIKRLLGSGIFLLIKPTSSKSHIFVSF
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Known secondary structure (DSSP)

SS




TT

TTSS


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence AIKRSCWAFDLSTSRVFKPYIDAGDLLVTDFVSYKLSKLTNLCKCVSLMESSFSFWAEAFGIPSWNFVGD
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Known secondary structure (DSSP) TTTB
S

S
SSSB

B
-

SB


TTT

SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LFRSSDSAAMDASYMGKLSLLTLLEDKAATEELQTIARYIIMEGFVSPPEIPKPHKMTSKFPKVLRSELQ
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Known secondary structure (DSSP) S

SS

GGG

TTS


GGGGGGGS
SSB
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence VYLLNCLCRTIQRIAGEPFILKKKDGSISWGGMFNPFSGRPLLDMQPLISCCYNGYFKNKEEETEPSSLS
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Known secondary structure (DSSP)


SSSSS
B
TTS

B


SS




--




 .........570.........580.........590.........600.........610.........620.........630
Sequence GMYKKIIELEHLRPQSDAFLGYKDPELPRMHEFSVSYLKEACNHAKLVLRSLYGQNFMEQIDNQIIRELS
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Known secondary structure (DSSP) TT

S
T




S

SS

TT



TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence GLTLERLATLKATSNFNENWYVYKDVADKNYTRDKLLVKMSKYASEGKSLAIQKFEDCMRQIESQGCMHI
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Known secondary structure (DSSP)
B
SS



TT
S
STTS



TTT

BTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence CLFKKQQHGGLREIYVMGAEERIVQSVVETIARSIGKFFASDTLCNPPNKVKIPETHGIRARKQCKGPVW
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Known secondary structure (DSSP)


-
--



T
SSBSSS
SSS
B
 .........780.........790.........800.........810.........820.........830.........840
Sequence TCATSDDARKWNQGHFVTKFALMLCEFTSPKWWPLIIRGCSMFTRKRMMMNLNYLKILDGHRELDIRDDF
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Known secondary structure (DSSP)






BTTSSTT

SS
GGGS

T
---



-
 .........850.........860.........870.........880.........890.........900.........910
Sequence VMDLFKAYHGEAEVPWAFKGKTYLETTTGMMQGILHYTSSLLHTIHQEYIRSLSFKIFNLKVAPEMSKGL
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Known secondary structure (DSSP)

-


SSB
TT
SSSS

SSSST
GGGSSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence VCDMMQGSDDSSMLISFPADDEKVLTRCKVAAAICFRMKKELGVYLAIYPSEKSTANTDFVMEYNSEFYF
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Known secondary structure (DSSP) B

B
B
SS


B

B
B

-TT
-

S

-


B
TT




TT


SSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence HTQHVRPTIRWIAACCSLPEVETLVARQEEASNLMTSVTEGGGSFSLAAMIQQAQCTLHYMLMGMGVSEL
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Known secondary structure (DSSP) TT

TTTS






SSSSS

TTTTT
T
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence FLEYKKAVLKWNDPGLGFFLLDNPYACGLGGFRFNLFKAITRTDLQKLYAFFMKKVKGSAARDWADEDVT
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Known secondary structure (DSSP)


GGGT





STTSSSS
STS
TTTT
STTS
SSSSSS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence IPETCSVSPGGALILSSSLKWGSRKKFQKLRDRLNIPENWIELINENPEVLYRAPRTGPEILLRIAEKVH
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Known secondary structure (DSSP) SSS





SSSS

S




S
STT

SS
TGGGSBTTB

ST
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SPGVVSSLSSGNAVCKVMASAVYFLSATIFEDTGRPEFNFLEDSKYSLLQKMAAYSGFHGFNDMEPEDIL
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Known secondary structure (DSSP) SSS
S


TTTTTTTTTTTTSS
SS

SS


TTTTSS

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence FLFPNIEELESLDSIVYNKGEIDIIPRVNIRDATQTRVTIFNEQKTLRTSPEKLVSDKWFGTQKSRIGKT
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Known secondary structure (DSSP) S





SS



S

GGGS

S

S
S

GGGTS

SSSS

S
S
STT
S
SSST
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence TFLAEWEKLKKIVKWLEDTPEATLAHTPLNNHIQVRNFFARMYDALMDLMIEDAKNNAFSHVVDCIELDV
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Known secondary structure (DSSP) TSS
S
S






SS

SSSS

--

SSS








-




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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