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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7eebH_

Fold library idPDB HeaderMoleculeTitle
c7eebH_2.90PDB header: protein transportChain: H: PDB Molecule: cation channel sperm-associated protein subunit epsilon;


Added to library: Sat Jul 31 08:47:42 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LWRYYINSQDYSIFSTRSSIKLEYEGNSFVSWKIPESCKVENTTSPKTTLHCKRAGIHTIKPIAGNQEVE
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Known secondary structure (DSSP)
S
S
SSS
STT

SS




TTSTTSSS
S

SS



 .........80.........90.........100.........110.........120.........130.........140
Sequence RHLTVDNSYICYLWYFTVVDVYYNLSQIVTIWVYDPESASTEELIWTAKKPSLSSRVLTKQMNTLGQRPF
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Known secondary structure (DSSP)


STTTT
TTT

TT


S

TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence IFTVEKRLTYHPGPLTSEGTWVIHLPMSSDDIAKVIRGNKVAFQDCFIANLYFMLTYPMTIISEPPGYEP
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Known secondary structure (DSSP) TTTT


S

SSS


SS



S

SSS




S







TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LTVPPGSPLMLSWDTCISTFALLATDQETFQTNDSFQTWTRVRAPPGILSDAQRHSLRDVIIFDQGTLFL
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Known secondary structure (DSSP)



TT



SSSTT

SS
SSSSSS


TTSS
TT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VDGTVYLRTEDEFTKLDESRGISETGILGFSKRRWCQIRYLYKLASKKSILIAWSKTTVYAGYATFRFVT
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Known secondary structure (DSSP) TT
SS



TTTT

SS





S

TSS


S
SS
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LTDTAKLKDFLKLPQTDTLEVMSVEYLWHPLEAAVLLSHCSVCTTNTRNIRIVIYSAIFQTWTLQDFELQ
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Known secondary structure (DSSP) TT

SSS

SSTT
SS

SSTTTT




 .........430.........440.........450.........460.........470.........480.........490
Sequence LPKEAILEFRFLYSAMPDIIMWDQHHVYYSYKNFTVVGTISTPSGETNLSSLSQGSKIHQVLTDRIGNVV
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Known secondary structure (DSSP) TT



SSSS


SS
TTTT
B
TTS


TTS


SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VKMENNVMFYIKADITEAVILHTWVNTTAKTVVLFDKSFEVCILYYNENLDEKYQLQTQPYPLILELQSI
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Known secondary structure (DSSP) TTS
TT

B




S
TT

SSS

TTS
SSSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence NKDLGDWCPYLAFQHNIHSQFYHMDKGESLTIWSQIVYPENRGLYIVVEHYGSSVMTWTQNLEYEIASGF
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Known secondary structure (DSSP)



S
S



S
TT

TT







TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence CTKTMITRFFQTTNYELVDNYYQLQKENTGLMLLQFRPSEFSRTCLTAKPVFEIDVGCDSSKYIMVRGFN
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Known secondary structure (DSSP)




TT
S
T
SS

TT





S

SS
TT

 .........710.........720.........730.........740.........750.........760.........770
Sequence KSRCQRRDFSYVIDKELLDNLKVRYDVAKYGCPLTLELGQMFQPIVELYDENGFIKIVDANFILWEIHGR
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Known secondary structure (DSSP) SSSS




SSB








SS

B



SSS

S
SS
B
 .........780.........790.........800.........810.........820.........830.........840
Sequence NDYTFNSTMEQNGCINEAQTWDSMIEENPDIPLDDVWGPQNYRPCFSYAIGKPGDLGQPYEILNYSNKNH
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Known secondary structure (DSSP) S

SSB

SS



S
SS
S
TTT


GGGSSSS



S

B


B
TT
S

 .........850.........860.........870.........880.........890.........900.........910
Sequence IKWPMTYAGMYVYRLKILDPNYSFCNLTTIFAIESLGMIPRSSVYLVAALIFVLMLTFISILVLSYFWYL
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Known secondary structure (DSSP)

SSS



TTS
SS










 ......
Sequence KIYRQF
Predicted secondary structure

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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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